Rhodothermus marinus DSM 4252: Rmar_2100
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Entry
Rmar_2100 CDS
T01119
Name
(GenBank) FAD dependent oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmr03016
]
Rmar_2100
Enzymes [BR:
rmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Rmar_2100
Transfer RNA biogenesis [BR:
rmr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Rmar_2100
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_9
FAD_binding_2
NAD_binding_8
HI0933_like
Pyr_redox_2
Amino_oxidase
FAD_binding_3
Thi4
AlaDh_PNT_C
GIDA
Motif
Other DBs
NCBI-ProteinID:
ACY48980
UniProt:
D0MD68
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Position
2451134..2452180
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AA seq
348 aa
AA seq
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MQPSSRIAIVGAGLAGACAAFALHRHAHVEVFEATEAADQAFRAAGGLFHPLMTRRARPN
WQHDAALEALERLLAAVGDRVPVRRGLLRVAFSEKQAQDFREAARTYPHFVQWLAPEEAK
ERFPQVQAPYGALWIPQGGAVSAARLIEVLLEQSGVPIHRPVRVVDWKEEPDGVRLHTDR
GAVHRFDYAILAPGYGYQAHPELARLPFQAVKGQVICLQRPPSLDTLPLVLANVHLAPYG
DQVFVGSTYEPAFTDLAPSEAQTRWLLDEAARWVPEVSRSTVVAALTGVRVIRPHRPLPV
LSPLPGRRRLWLFSALGSRGLLYAPLLASWLPEVLERPERLPEAVRLD
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcatccagaattgccatcgtcggggccggtctggccggtgcctgcgcggcg
ttcgcgttgcaccgacacgctcacgtagaggtgttcgaggccaccgaggcagccgaccag
gcctttcgggcggccgggggcttgtttcatccgcttatgacgcgtcgggcgcgccccaac
tggcagcatgacgcggcgctggaagcgctggagcggctgctggccgccgtgggcgaccgg
gtgcccgtccgccggggactgctgcgcgtggccttttccgaaaagcaggcgcaggacttc
cgggaggctgcccgcacctatccgcacttcgtgcagtggctggcacccgaggaggcgaag
gaacgcttcccgcaggtgcaggccccttatggggcactctggattccgcagggcggtgcc
gtttcggctgcccggctcatcgaagtgctgctggaacaaagcggcgtaccgatacaccga
ccggtccgcgtcgtggactggaaagaggagcccgacggcgtgcgcctgcataccgatcgg
ggcgcagtgcaccggttcgactatgcgatcctggcgcccggctacggctaccaggcgcat
cccgagctggcccggctgccatttcaggccgtcaaaggacaggtgatctgtctgcagcgg
cctccttcgctcgataccctgccgctggtgctggccaatgtgcacctggcaccttacggc
gatcaggttttcgtggggagcacctacgagccggcgttcacagacctggcgccttccgag
gcgcagacccgctggctgctggatgaagccgcccgctgggtgccggaagtttcccgaagc
accgtcgtcgcggcgctgacgggcgtgcgcgtgattcgtccgcatcgtccattgcccgta
ctcagcccgctgcccggccgacggcgcctctggttgttctcggcgctgggttcgcggggg
ttgctctatgcgccgctgctggcttcctggttgccggaagtgctcgaacgcccggaacgt
ctgcccgaggcggtacgtctggactga
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