Rhodothermus marinus DSM 4252: Rmar_2192
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Entry
Rmar_2192 CDS
T01119
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmr03032
]
Rmar_2192
03400 DNA repair and recombination proteins [BR:
rmr03400
]
Rmar_2192
Enzymes [BR:
rmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rmar_2192
DNA replication proteins [BR:
rmr03032
]
Prokaryotic type
DNA Topoisomerases
Rmar_2192
DNA repair and recombination proteins [BR:
rmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rmar_2192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
ACY49071
UniProt:
D0MDS7
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Position
2552011..2554572
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AA seq
853 aa
AA seq
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MEAEKPRIIPVNIEEEMKSSYIDYSMSVIVGRALPDVRDGLKPVHRRVLYGMYELGLTAS
APYKKSARIVGEVLGKYHPHGDAAVYDTMVRMAQDFAMRYPLVDGQGNFGSIDGDSPAAM
RYTEARLTRLAEEMLRDIDKDTVDFQDNFDGSLKEPVVLPAALPNLIVNGADGIAVGMAT
KIPPHNLGEAVDALVAMIDNPDISLDELLKHLPAPDFPTGGIIYGYSGVKEAYATGRGRI
LIRARIHEEEIRPGRMALVITEIPYQVNKSSLIEKIAHLVRERRIDGITDIRDESDREGL
RVVLELRKDAVPLVIQNQLYKYTPCQQTFGVNMVALVNGRPRTLTLKELMRHYLDHRHEV
VTRRTRFELRKAEERAHILEGLKIALDHLDLVINIIRYSADPDEARQRLMEGVLPERLTP
EQRERLGLPVEQISHFTLTEAQANAILALRLSRLTGLERQKLEEEYRALLQEIERLRSIL
ASEPLRWQIIREELLELKQKYADARRTEIDYAGGGDFAIEDLIEDEQVVVTLSHQGLIKR
TPVHIYRQQGRGGVGMKASGMREDDYIEHLFACKNHDYLLFFTDHGRCYWLRVYDIPEGS
RTSLGRSIRNLIQIAPDDRVRAVLNIRKEDFENPEFLRTHYVLMATRQGLVKKTELEAFS
RPRADGIIAIAFAEGDELIEAVLTDGRAHVLLASSGGRVVRFDESDVRPMGRNTRGVRGI
ALETGEQVVGMVAVSPEASPCILSISANGYGKRTPLEEYPVHRRGGKGVWTMKITPRTGR
LIAIKAVQDTDDLMIITQNGLMIRIHVADISRMGRHTQGVRLIQLKPGDAIADVTRLVTE
AQEDEAAAAPAIA
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaaaaacctcgcattattcctgtcaatattgaggaggaaatgaaatcctcc
tacatcgactattccatgtcggtgattgtgggccgggcgttgccggacgtacgcgacggg
ctcaagccggttcatcgccgcgtgctttacggcatgtacgagctcggcctgacggccagc
gccccttacaagaaaagcgcccgtatcgtcggcgaggtgctcggtaagtaccacccgcac
ggcgacgcggccgtctacgacacgatggtgcgtatggcgcaggacttcgccatgcgctat
ccgctggtcgacggccagggcaacttcggctcgatcgacggcgacagtcccgccgccatg
cgctacacggaggcgcgcctgacgcgcctggccgaagaaatgctgcgggacatcgacaag
gacaccgtcgattttcaggacaacttcgacggctccctgaaggagccggtcgtgttgccg
gccgccctgcccaatctgatcgtcaacggcgccgacggcatcgctgtgggcatggccacc
aagatccctccgcacaacctgggcgaggccgtcgatgcgctcgtggccatgatcgacaac
ccggacatctcgctggacgagctgctgaagcatcttccggcaccggacttccccacgggc
ggcatcatctatggctacagcggggtgaaagaggcctacgcgaccggccgcggccgcatc
ctgatccgcgcacgcatccacgaagaggagatccggccgggccgcatggcgctcgtcatc
acggaaatcccctatcaggtcaacaaaagcagcctgatcgagaagatcgcgcatctggtg
cgggagcgccgcattgacggcatcacagacatccgggatgaaagcgaccgcgaaggcctg
cgcgtcgtgctggagctgcgcaaagacgccgtgccgctggtcattcagaaccagctctac
aagtacacgccctgccagcagaccttcggcgtgaacatggtggcgctggtgaacggccgg
ccgcgcacgctcacgctcaaagaactgatgcgccattacctggatcaccggcacgaggtc
gtaacgcggcgcacccgcttcgaactgcgtaaggccgaggagcgtgcccacatcctggaa
ggcctcaagatcgcgctcgatcacctcgacctcgtcatcaacatcattcgctattcggcc
gacccggacgaagcgcgccagcgcctcatggaaggcgtgctgcctgaacggctcacgccg
gagcaacgggagcggctggggttgcccgtcgagcagatttcgcatttcacgctcaccgag
gcgcaggccaatgcgatccttgccctccgactgagccgcctgaccggcctcgagcgccag
aagctcgaagaagaataccgggcgctgctccaggaaatcgagcgcctgcggagcatcctg
gccagcgagccgttgcgctggcagatcatccgggaagagctgctcgagctgaagcagaag
tatgccgacgcgcggcgtacggagatcgactatgcgggcggcggcgactttgccatcgag
gacctgatcgaagacgagcaggtggtggtcacgctgtcgcaccagggactgatcaaacgc
acgccggttcacatctaccggcaacagggccgcggcggcgtcggcatgaaggccagcggc
atgcgcgaagacgactacatcgaacacctgttcgcctgcaagaaccacgattacctgctc
tttttcacggaccacggccgctgctactggctgcgcgtttacgacatcccggagggcagc
cgcaccagcctcggccgctccattcgcaacctgatccagattgcgcccgacgatcgcgtg
cgcgccgtgctgaacatccgcaaggaggacttcgaaaatccggaattcctgcgcacgcac
tacgtgctgatggccacgcgccagggtcttgtcaagaagacggagctggaagccttcagc
cgtccgcgggccgacggcatcatcgccattgcctttgctgaaggggacgagctgatcgaa
gcggtgctgaccgacggccgggcgcacgtgctgctggcctcgtcgggcggacgcgtcgtg
cgcttcgatgaatcggacgtgcggccgatgggccgcaacacgcgcggcgtacggggcatt
gcgctggagaccggcgaacaggtcgtgggcatggtggccgtctcgcccgaagcctcgccc
tgcattctgtcgatcagcgccaacggctacggcaagcgcacgccgctggaagagtatccc
gtccaccggcggggcggcaagggcgtctggaccatgaagatcacgccgcgtacgggccga
ctcatcgccatcaaggccgtgcaggacaccgacgatctgatgatcatcacccagaacggc
ctgatgatccgcatccacgtggccgacatcagccgtatgggtcggcacacccagggcgtc
cggctgatccagctcaagcccggcgatgccattgccgacgtgacacgcctggtcaccgaa
gcccaggaagacgaagcggccgccgcaccggccatcgcctga
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