Rhodothermus marinus DSM 4252: Rmar_2557
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Entry
Rmar_2557 CDS
T01119
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmr03009
]
Rmar_2557
Enzymes [BR:
rmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rmar_2557
Ribosome biogenesis [BR:
rmr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rmar_2557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_11
PrmA
UPF0020
TRM5-TYW2_MTfase
N6_N4_Mtase
PCMT
Methyltrans_SAM
Methyltransf_4
RrnaAD
FtsJ
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ACY49433
UniProt:
D0MFU4
LinkDB
All DBs
Position
2972890..2974290
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AA seq
466 aa
AA seq
DB search
MLKKGAELELIVEKFADRGKSLTRVDGYVLFVEGGVPGDRARVRVVKRKKNYAEGRIVEL
LEPSPLRTEPCCRYFGTCGGCKWQHVRYEAQLEAKRQSVYEALVHHGGFEDVEVRPTLPS
PRLYGYRNKMEFSFSADRWLTPEEIASGRPLDRHFAVGLHVPGNFYKVIDLEECHLPEPI
TVRLLNELRAFFKAKGWEPWDIRRHEGYLRHLVIRTGTRTGEVMVNLVTSRYDEARMAEL
GAFLQEQFPEVTTLVNTINSRPAQVSYGEATYTIFGPGVIHDCIGPFRFEIAPDAFFQTN
TEQAERLYEVARELAALRPDDLVYDLYCGTGTISIFIAPHVRHVVGVELVASAVENARAN
AAANGITNCTFVAGDLLEVLTPAFVRTHGRPDVVIVDPPRAGMHPKVVRRIGQLRPERFV
YVSCNPQTQARDLKLLRDLYRIEAVQPVDLFPHTDHVESVVALRAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaagaaaggcgccgagctggaactgatcgtcgaaaagtttgccgaccgcggcaag
tcgctcacccgcgtggacggctacgtgctgttcgtcgaaggcggcgtgcccggcgaccgg
gcgcgcgtgcgcgtcgtcaagcgcaagaaaaactacgccgagggccgtatcgtcgagctg
ctcgaaccgagcccgctccgcaccgagccgtgctgccgctacttcggcacctgcggcggc
tgcaagtggcagcacgtgcgctacgaagcccagctcgaagccaaacgccagagcgtctat
gaggcgctcgttcatcacggcggcttcgaagacgtcgaggtgcgccccacccttccctcg
ccccggctctacggctaccgcaacaagatggagttttccttcagcgccgaccgctggctg
acgcccgaggaaatcgccagcggccggccgctcgaccgccattttgccgtggggctccac
gtgccgggcaacttctacaaggtgatcgatctggaggaatgccacctgcccgagccgatc
accgtgcggctgctcaacgagctgcgggccttcttcaaggcgaagggctgggagccgtgg
gacatccgtcggcacgaaggctacctgcgccatctggtgatccgaaccggcacgcgcacc
ggcgaggtcatggtcaacctggtcaccagccgctacgacgaagcccgcatggccgagctg
ggcgccttcctgcaggagcaatttccggaagtcactacgctggtcaacacgatcaattcg
cgcccggcccaggtctcctacggcgaggccacctacacgatcttcggaccgggcgtcatt
cacgactgcatcggaccgtttcgcttcgagattgcgcccgacgccttcttccagacgaac
accgaacaggccgagcggctctacgaagtggcccgcgagctggccgccctgcgtccggac
gatctggtttacgacctctactgcggcaccggcacgatctccatcttcatcgccccgcac
gtgcggcatgtggtgggcgtggagctggtggcgtcggccgtcgaaaacgcccgcgccaat
gcggcagccaacggcatcacgaactgcaccttcgtggccggcgacctgctggaagtgctc
acgccggcgttcgtgcgcacgcacggccgccccgacgtcgtgatcgtcgacccgccgcgg
gccggtatgcatccgaaggtggtgcgccgcatcggccagctccggccggaacggttcgtc
tacgtgagctgcaatccccagacccaggcgcgcgacctgaagctgctccgcgacctgtat
cggatcgaggccgtgcagcccgtcgatctgtttccgcacaccgaccacgtggaaagcgtc
gttgccctgcgggcccgttaa
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