Entry
Name
(GenBank) CRISPR-associated RAMP protein, Csm4 family
KO
K19139 CRISPR-associated protein Csm4
Organism
rmr Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:rmr00001 ]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:rmr02048 ]
Rmar_2823
Prokaryotic defense system [BR:rmr02048 ]
CRISPR-Cas system
Type III CRISPR-Cas system
Subtype III-A factors
Rmar_2823
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
pRMAR01:complement(26617..27636)
Genome browser
AA seq
339 aa AA seq DB search
MTFQAVYLYPRASFRTPLRSDTLWGLLVVALRVVAGDREADAFIESCEQGRPPIRLSSAF
PFMQEQSADGRPVFRHFFPRPVLPPPLLEPSQADAQVVFEQMRQGKKVRRIRWLPQELFE
RVLRGELDEAELQQELLQQEQSGARKRWPVLLTQDNLHTSIDRLTGTTRQENGAGQLFYS
HEYYMERGQGLFFLVEGEVARILPALRYLHHVGWGGDSSVGKGHFDWELRELELRVPEKP
THRLLLSLYSPTRAELDHIRQHRDRTFYQLERRQGYAGAHRLPGRAYLKRPLYMLSEGSL
VPDPGRPLLGAVHTVMEAAGVQVRHSGLALDLPARVGLS
NT seq
1020 nt NT seq +upstream nt +downstream nt
atgacgtttcaggctgtctatctgtatccccgcgcttcttttcgtacgcccctgcggtcc
gacacgctctggggactgcttgtggtagcgctgcgcgtggtggcaggcgaccgggaggcc
gacgccttcatcgaatcctgtgagcaagggcggccgccgatccgtctttcctcggccttc
cccttcatgcaggagcaatccgcggatgggcggccggtttttcgccactttttcccgagg
ccggtcctcccgccgcccctgctggagccatcgcaggccgatgcgcaggtcgtttttgag
cagatgaggcaggggaagaaagttcgccggatacgctggcttccgcaggagctctttgaa
cgcgtactgcggggcgagctcgacgaggcggagctgcagcaggagcttctgcagcaggag
cagtccggagcgcgaaaacgctggcccgtgcttctcacgcaggacaacctgcatacttcg
atcgaccggcttaccggcaccacgcgccaggaaaacggggccggccagctcttctacagc
cacgaatactacatggaacgtggtcagggtctgttctttctggttgagggggaggtagca
cgcattctgccggccctgcgctacctgcaccatgtgggctggggcggcgacagttcggtg
ggcaaggggcatttcgactgggaattgcgcgagctggagctgagggtgcctgagaagccc
acgcatcggctgctcctttcgctctacagtcccacgcgtgcggagctggaccatatccga
cagcaccgggaccgcacgttttatcagctggagcgacggcagggctatgccggagctcat
cggctgcccggaagggcttacctgaaacggccgctgtacatgctgtcggaagggtcgctc
gttcccgatcccggccgtccactgctgggcgcggtgcatactgtgatggaagcggccggg
gttcaggtgcgtcatagcgggctggcgctcgacctgcccgccagggtcggtttatcctaa