Rickettsia massiliae MTU5: RMA_0273
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Entry
RMA_0273 CDS
T00605
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rms
Rickettsia massiliae MTU5
Pathway
rms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RMA_0273 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rms03400
]
RMA_0273 (uvrB)
DNA repair and recombination proteins [BR:
rms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RMA_0273 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RMA_0273 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_22
Microtub_bd
HH_RND_rel
T2SSE
P-loop_SecA
DUF87
AAA_5
AAA_7
LarB_N
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ABV84545
UniProt:
A8F0V9
LinkDB
All DBs
Position
complement(277221..279206)
Genome browser
AA seq
661 aa
AA seq
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MNNFSIISEYKPAGDQPKAIDEIIAGLSSKKRSQILLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYSEMKSIFPKNAVEYFVSYYDYYQPEAYIARTDTFIEKDSSINEQIDL
MRHAATRSLLERRDVIVVSSVSCIYGLGSPDLYYQMMVNLEPGQSYPRDQLLNDLINLQY
ERNDIGFERGCFRVKGDNIDIFPSHYSNKAWRLSFFGNELEYIHEFDPLTGAKLAKLDKA
MVFGNSHFVMPQETVNNAISGIEEELQKRLEFLKSQDKPLETQRLNQRTQYDLEMLTETG
NCKGVENYSRFFTGRNAGEPPPTLFEYLPEDALLFVDESHVSVPQIRAMYNGDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQIEDLISEIQTTIAKGFRVLVTTLTKKMAEDLTAYLQELKYKTSYLHSHVH
TLERIEILRDLRQGTIDILVGINLLREGLDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSEGRVILYADKMTKSIDKAVSETLRRRQIQQEYNAKHGIIPKTINRTIHALAEFEK
IDSKLDKKQAHTLFDNPAKLKTHIDKLKKEMLKAASNLEFEQAAKLRDQLKTLEEAALEL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcagaatataaaccagcaggcgatcaaccaaaagcaata
gatgaaattatagcagggttaagtagcaaaaaacgctcacaaatattgcttggtattacg
ggatcaggcaaaacctttactatggcaaatattatagaaagaactaatcgtcctactctt
attatggctcataataaaactttagctgcacaaatctattcagagatgaaatcgattttt
ccaaagaatgccgttgaatactttgtctcatattatgattattaccagcccgaagcttat
atagcacgcaccgatacttttatagaaaaagactcatcaattaacgaacagattgattta
atgcgtcatgccgctacaagatcgctattagagcgtcgtgacgttatagtagtttcttcc
gtttcctgtatttacgggcttggctctcccgatttatattaccaaatgatggttaatcta
gagcctggtcaaagctaccctcgtgatcagctactaaacgatttgataaatctacaatat
gagcgtaacgatatcggatttgagcgtggctgttttagagttaaaggcgacaacatcgat
attttcccctcacattacagcaataaagcttggcgtttatcgtttttcggtaatgaactc
gaatatatccatgaatttgatcccctaacaggtgcaaaacttgctaagctcgataaagct
atggtttttggtaattcacattttgtgatgcctcaagaaacggtcaataatgccatatca
ggtattgaagaagaattacaaaaacgcttagagtttttaaagtcacaagacaaaccactt
gaaactcaaaggctaaatcaacgtactcaatatgatcttgaaatgttaacggaaaccggc
aactgtaaaggcgttgaaaactactctcgctttttcacaggacgtaatgccggtgagccg
cctcctacattattcgaatacctaccagaagatgcattattatttgttgatgaaagccat
gtatccgtaccgcaaattagagcgatgtataacggcgatcgcgcaaggaaagaagttttg
gtagagcatgggtttcgtctaccctctgcacttgataacagacctttaaaatttgaagaa
tgggaaaaatttagaccacaaactgtgtttgtatctgcaactccaggaccgttcgagtta
gaagaaaccggcggcacggttgtagaattgattatcagacctacggggctgcttgatcct
gaatgtattattaaacccgctaccaaccaaattgaggatttaattagcgaaattcaaacc
actatcgctaaaggttttcgtgttctagtcaccaccttaactaaaaaaatggcagaagat
ttaaccgcctatttgcaggagctaaaatataaaacttcttatttacattctcacgttcat
actctagagcgtatagagattttacgagatttaagacaaggtactattgatattttagtc
ggtattaatctattaagggaggggcttgacatccctgaatgcggcttagttgctatactt
gatgcagacaaagaggggtttttgcggtcggaagtatcgttaatacaaacaataggaaga
gctgcaagaaatagcgagggtagagttatactttatgccgataaaatgactaaatctatt
gataaagccgttagtgaaacgttgcgtagaaggcaaattcagcaggaatataatgcaaaa
cacggcataattccaaaaaccatcaaccgtactattcacgctttagcagaatttgagaaa
atcgatagtaagcttgataaaaaacaagctcatactttatttgataatcctgctaagcta
aaaacccatattgataaattaaagaaagaaatgcttaaagccgcaagtaatcttgaattt
gaacaagccgcaaaacttcgtgatcagctaaaaactctagaagaggcggcactcgagttg
agttaa
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