Rickettsia massiliae MTU5: RMA_0463
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Entry
RMA_0463 CDS
T00605
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rms
Rickettsia massiliae MTU5
Brite
KEGG Orthology (KO) [BR:
rms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rms03032
]
RMA_0463 (topA)
03400 DNA repair and recombination proteins [BR:
rms03400
]
RMA_0463 (topA)
Enzymes [BR:
rms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RMA_0463 (topA)
DNA replication proteins [BR:
rms03032
]
Prokaryotic type
DNA Topoisomerases
RMA_0463 (topA)
DNA repair and recombination proteins [BR:
rms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RMA_0463 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
Zn_ribbon_Top1
POLR3C_WHD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABV84684
UniProt:
A8F198
LinkDB
All DBs
Position
complement(459071..461401)
Genome browser
AA seq
776 aa
AA seq
DB search
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHVNDQTLEKFSIINEKNAKDLIEKLKS
QKFHVDKIEKKQQKRQPQPPFITSSLQQDAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLEKDYYKLYELIWKRTIACQMENVIMNLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESVDDEAEEENKMLPPLKEQEPLKTKEVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKVC
TSCNTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENEGEPAAMPNENKVLGTDK
DGVEIYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIMVGYGKFGPYIKYMGKFIAVQKKYDFLNLSLDDAMKLIEENKEKLEKKQA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacgataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtgttacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagttaaagatgctaaaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgaaggtgaatctatctcatggcatgttgcagaggtaataaaagaaaagaat
caagttaaatccgatgattttttcaaaagggtagcatttaacgaaatcactaaaaaagca
attattcatgccgttgaaaatcctaggaaacttgacactaacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccaggatgtaaatcggcaggacgtgtgcagtccgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcacgtaaacgatcagacatta
gaaaaattctcaattattaacgaaaaaaacgccaaagatttaatcgaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattacttcatcactacaacaagacgcagcaagaaaattagggtttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccgactagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagcaataagacccacaaatattact
tatactcctgatagcttaaaagaaaagctagaaaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatggaaaatgttataatgaatttggtagttgca
aatttagcttcggaaaataaagaatatttggcaaaagcaaacggatcgactatagccttt
gacggattttacaaggtttatcgtgaaagtgtggacgatgaagctgaagaagaaaataaa
atgctgccgcctttaaaagaacaagagccacttaaaactaaagaagttattccaaatcaa
cattttaccgaaccgcctccaagatattcagaagcaagtttagtgaaaaaacttgaagag
cttgggatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgctttatacctgaagagcttggacgtttggtcacggta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgaaatagcagctggcaaacttgaatggaaagctgctttaaataatttttgg
agcggttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacagaaagcccttgattatcacttgttcggtgagaataaagaatctaaagtttgt
acttcatgtaacacgggcgagcttagcttaaaacttggtaaattcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacgataataac
gagaatgaaggcgagcctgccgctatgcctaatgagaataaagttttaggtacggataaa
gacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcgaa
caagaaggcaaagtaaagccgaaacgtagccccgtgcctgctagcttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattatggtaggatacggtaaattcggtccttacataaaatatatg
ggtaaatttattgcagtgcaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagagaaattagagaagaaacaggcgtaa
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