Rickettsia massiliae MTU5: RMA_0596
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Entry
RMA_0596 CDS
T00605
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rms
Rickettsia massiliae MTU5
Pathway
rms00300
Lysine biosynthesis
rms00470
D-Amino acid metabolism
rms01100
Metabolic pathways
rms01110
Biosynthesis of secondary metabolites
rms01120
Microbial metabolism in diverse environments
rms01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rms00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RMA_0596 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RMA_0596 (dapF)
Enzymes [BR:
rms01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RMA_0596 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Fer2
S_layer_C
Motif
Other DBs
NCBI-ProteinID:
ABV84775
UniProt:
A8F1I9
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All DBs
Position
583100..583912
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AA seq
270 aa
AA seq
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MISKINFVKMHGLGNDFVIVNKRDLSSSYDLSQLAKNMAERHTGIGCDQFIIYEEHNDFY
EMIIYNIDGSSAKLCGNATRCLAKLIYLDTGKKDITVMVGNKKLLCNVNDENNISVNVGS
VSFNEAWMPSRDKVWAFAERYMIDLKETICVDIGNPHLIIFSKLEPQDQKIVGEKLQAKE
LFADGVNVNFAEVKDNKIYLSVWERGAGLTLACGSGACGSFAAGLKLGFIHSPSTIVFKH
GNLTMKEENGNIIMQGAATLVARGEYYCEQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaattaattttgtaaaaatgcatggtctcggtaatgattttgttattgtt
aacaaacgagatttatcaagttcatatgatttatcgcagttagcaaaaaatatggctgag
cgtcatacaggtatcggttgcgatcagtttattatttatgaagagcataatgatttttat
gaaatgattatatataacatagacggctctagtgctaaattatgcggtaatgctacaaga
tgtttagccaagttaatttatcttgatacgggaaagaaagatattactgtaatggtaggc
aataaaaaattgctatgtaatgtcaatgatgaaaataatattagcgttaatgtaggaagc
gttagttttaatgaagcttggatgccaagtcgtgataaagtttgggcatttgcagagcgt
tatatgattgatttaaaggaaactatttgcgttgatataggtaatccgcatttgattatt
tttagtaagttagaacctcaagatcaaaaaattgtcggtgaaaaattgcaggctaaggaa
ttatttgcagatggggtaaacgttaattttgctgaagtaaaagataataaaatctattta
tccgtttgggagcggggggcagggttaacgcttgcttgcggaagcggagcttgcggtagt
tttgctgccggtttaaagctcggttttatccattcaccaagtactatagtctttaagcac
ggtaaccttactatgaaagaagaaaacggtaatataataatgcaaggggcagctacgctt
gtagcacgtggggaatattattgtgagcaataa
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