Rickettsia massiliae MTU5: RMA_1172
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Entry
RMA_1172 CDS
T00605
Symbol
glyA
Name
(GenBank) Glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rms
Rickettsia massiliae MTU5
Pathway
rms00260
Glycine, serine and threonine metabolism
rms00460
Cyanoamino acid metabolism
rms00630
Glyoxylate and dicarboxylate metabolism
rms00670
One carbon pool by folate
rms00680
Methane metabolism
rms01100
Metabolic pathways
rms01110
Biosynthesis of secondary metabolites
rms01120
Microbial metabolism in diverse environments
rms01200
Carbon metabolism
rms01230
Biosynthesis of amino acids
rms01240
Biosynthesis of cofactors
rms04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RMA_1172 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RMA_1172 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RMA_1172 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RMA_1172 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RMA_1172 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RMA_1172 (glyA)
Enzymes [BR:
rms01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RMA_1172 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF5770
WD40_Prp19
DUF1815
Motif
Other DBs
NCBI-ProteinID:
ABV85161
UniProt:
A8F2M5
LinkDB
All DBs
Position
complement(1142712..1143974)
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AA seq
420 aa
AA seq
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MNIFNKNLHETDKEINEIIKHEKLRQSSVIELIASENFVSPAVLEAQGSLLTNKYAEGYP
SKRFYNGCEEVDKAENLAIERVKKLFNCKYANVQPHSGSQANQAVYLALLQPGDTVLGMS
LDSGGHLTHGAAPNMSGKWFNVVSYSVNKETYLIDYDEIERLADLHKPKLLIAGFSAYPR
NIDFAKFREIVDKVGAYFMADIAHIAGLVATGEHQSPIPYAHAVTSTTHKTLRGPRGGLI
LSNDEEIGQKINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKSYIQQVISNAKALASS
LQERGYDILTGGTDNHIVLVDLRKDGITGKFAANSLDRAGITCNKNAIPFDETSPFITSG
IRLGTPACTTRGFKEKDFVLVGYMVADILDGLKNNEDNSDLEQKVLNEVTKLIKLFPFYG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttaataaaaatttacatgaaacggataaagagattaatgaaataataaag
catgaaaagctacgtcaaagtagcgtaatcgagcttattgcatcagaaaatttcgtaagt
cctgctgtgcttgaagctcaagggtcgcttctgactaacaaatatgccgaaggataccca
agtaagcgattctataacggttgcgaggaagtagataaagctgaaaatttagctatagaa
cgagtaaaaaaactctttaactgcaaatatgcaaatgtccaacctcattcaggatcacaa
gcaaatcaggctgtatatcttgctttattacagccgggtgatacggttcttggtatgtct
ttagatagcggcgggcatctaacgcacggtgcagctcctaatatgtccggtaaatggttt
aacgtcgtttcttatagtgtaaataaagagacttatttaatcgattatgatgagattgaa
cgcttagcggatttacataaaccaaaattacttatagccggtttttctgcttatcctcgt
aatattgattttgcaaaatttagagaaatcgtggataaagtaggagcttactttatggca
gatattgctcatattgcaggacttgttgccacaggtgagcatcaaagccctattccttac
gctcacgctgttacctctactactcataaaacacttagaggtccaagaggcggtttaatt
ttatctaacgatgaagagataggtcaaaaaataaattctgcattatttccaggactacaa
ggtggtccgttaatgcatataatcgccgcaaaagccgtagcttttttagaaaatttgcag
cctgaatataaaagttatattcagcaggtaataagtaacgctaaagctttagcaagtagc
ttgcaagaaagaggatatgatatattaacaggtggtaccgataatcatattgttttagtg
gatttgcgtaaagacggaatcacgggtaagtttgccgcaaattctttggatagagcaggg
attacgtgtaataagaatgctatcccgtttgatgaaacttcgccttttatcacttcaggt
attcgccttggtactcccgcatgtactactagaggctttaaagaaaaggattttgtatta
gttggttatatggtagcagatattttagacggcttaaaaaataatgaagataatagcgat
cttgagcagaaagtattaaatgaagtgacaaaattaattaaattatttccgttttatggc
taa
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