Roseomonas marmotae: IAI58_00375
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Entry
IAI58_00375 CDS
T08030
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt03030
DNA replication
rmt03410
Base excision repair
rmt03420
Nucleotide excision repair
rmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IAI58_00375 (polA)
03410 Base excision repair
IAI58_00375 (polA)
03420 Nucleotide excision repair
IAI58_00375 (polA)
03440 Homologous recombination
IAI58_00375 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmt03032
]
IAI58_00375 (polA)
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_00375 (polA)
Enzymes [BR:
rmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IAI58_00375 (polA)
DNA replication proteins [BR:
rmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IAI58_00375 (polA)
DNA repair and recombination proteins [BR:
rmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IAI58_00375 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IAI58_00375 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
NYN_YacP
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QTI79332
LinkDB
All DBs
Position
86736..89606
Genome browser
AA seq
956 aa
AA seq
DB search
MATTKPAAGAADLPAEVVRQDKPHLILVDGSGYIFRAFHALPPMTRPDGVPVNAVFGFTS
MLGNFLTKHAGSHIAVVFDRSRVTFRNQIYADYKAHRPEPPPELVPQFALIREATAAFGV
ACLELENYEADDLIAAYAKAFSAEGGQVTVVSSDKDLMQLVGPNVQLLDPIKQKPIREPE
VFEKFGVTPDKVVEVQALAGDSTDNVPGVPGIGLKTAAQLIQEYGDLENLLACAGQIKQP
KRRESLQNFAEQARISRQLVLLDADAPLPRPIDELLAQPPEPGKLAVFLRDQGFRSLLHR
MGLEGDAGTPATSQPRHAPAILAQAEPVGAPPEDAPGFGPYETVTDLETLNRWVEEARAA
GTVALDTETDSLDALNAKLVGISLAVAPGRACYIPLAHGPKPGNGDMLEAAPEAPVQIPL
REALSALQPMLEDPATLKVLHNAKYDLEVLGRPQAEGANSGIEVSPVDDTMLISYSMDAG
RHGHGMDELSLRHLGHSPIPYDQVTGTGRNRVPFSQVDLEKATAYAAEDADVTLRLWQML
KPRLRTDKALALYEQVERRMIAVLKQMEMAGIRVDGVELARIGEDFSQRMVTLEQQIHEL
AGRPFNVGSPKQLGEILFDEMKLPGGKRGKAGAWGTDASVLEDLAARGHELPRTVLHWRQ
LSKLKSTYVEGLAAQLDPRDGRVHTDFSMAITSTGRLSSTEPNLQNIPIRTEEGVRIRRA
FVASPGHVLLAADYSQIELRLLAHLADVPSLREAFAQDEDIHSRTASDIFGLPPDKVDRE
ARRRAKTINFGIIYGMSAFGLAARLGIGPGEAKGIIDAYFAQYPGIRAEMERLKEEARIN
GFALTPFGRKLWIDGITSKDMSRRGNAERAAINAPFQGGAAEIIKRAMVRMPKALKDAGL
DAKMLLQVHDELLFEVPQGQLTATSAVVKQVMESVAELRVPLRAEIGHGANWAEAH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactaagccggccgccggcgcggcggacctcccggccgaggtggtgcggcag
gacaagcctcacctcatcctggtcgatggctcgggctatatcttccgcgccttccatgcc
ctgccgccgatgacgcggccggatggcgtgccggtcaatgccgtcttcggcttcaccagc
atgctgggcaatttcctgaccaagcatgcgggcagccatatcgcggtggtcttcgaccgc
tcccgcgtcaccttccgcaaccagatctatgccgactacaaggcccaccgcccagagccg
ccgccggagctggtgccgcaattcgcgctgatccgggaggccacggccgccttcggcgtc
gcctgcctggagctggagaattacgaggccgacgatctgatcgccgcctatgccaaggcc
ttctcggccgagggcgggcaggtgacggtggtctcctccgacaaggacctgatgcagctg
gtcgggcccaacgtccagttgctggacccgatcaagcagaagccgatccgcgagcccgag
gtcttcgagaaattcggcgtcaccccggacaaggtggtggaagtccaggccctggccggc
gacagcacggacaacgtgcccggcgtgcctggcatcggcctcaagaccgccgcccagctc
atccaggaatatggtgacctggagaacctgctggcctgcgccgggcagatcaagcagccc
aagcgccgcgaatcgctgcagaatttcgccgagcaggcccgcatcagccgccagctggtg
ctgctggatgccgacgcccccctgccccggcccatcgacgaattgctggcccaaccgccg
gagccaggcaagctggccgtcttcctgcgcgaccagggttttcgctccctgctgcaccgc
atggggctggagggcgatgccggcacccccgccaccagccagccgcgccatgcccccgcc
atcctggcccaggccgagccggtgggcgccccgcccgaggacgcgcccggcttcggcccc
tacgagaccgtcaccgacctcgagaccctgaaccgctgggtggaggaggcgcgcgccgcc
ggcaccgtggcgctggataccgagacggacagcctggacgcgctgaacgcgaagctggtc
ggcatctcgctcgccgtggcgccgggccgcgcctgctacatcccgctggcccatggcccc
aagcccggcaatggcgacatgctggaagcggcgcccgaggcccccgtgcagatcccgctg
cgcgaggcgctctccgctttgcagccgatgctggaggaccccgccaccctgaaggtgctg
cacaacgccaaatacgacctggaagtgctcggccgcccgcaggccgagggcgccaatagc
ggcatcgaggtttctcccgtcgatgacaccatgctgatctcctacagcatggatgccggc
cgccatggccatgggatggacgagctgtcgctgcgccacctcggccacagccccatcccc
tatgaccaggtcaccggcaccggccgcaaccgcgtccccttctcccaggtcgatctggag
aaggcgacggcctatgccgccgaggatgccgatgtcacgctgcggctgtggcagatgctc
aagccccggctgcgcaccgacaaggcgctcgcgctctacgagcaggtggagcgccgcatg
atcgccgtgctgaagcagatggagatggcgggcatccgcgtcgacggcgtggaactggcc
cgcatcggcgaggatttctcccagcgcatggtgacgctggagcagcagatccacgaactc
gccggccgccccttcaacgtcggctcccccaagcaactgggagaaatcctgttcgacgag
atgaagctgcccggcggcaagcgtggcaaggccggcgcctggggcaccgatgccagcgtg
ctggaggatctcgccgcccgcgggcatgaactgccccggacggtgctgcactggcgccag
ctctccaagctgaaatcgacctatgtggaagggctggcggcgcagctcgacccgcgcgac
ggccgcgtccacaccgatttctccatggccatcacctccacgggccggctctcctccacc
gagccgaacctgcagaacattcccatccgcaccgaggaaggcgtgcgaatccgccgcgcc
ttcgtggcctccccggggcatgtgctgctggcggccgactattcgcagatcgagctgcgg
ctgctggcccacctcgctgatgtgcccagcctgcgcgaggctttcgcccaggacgaggac
atccacagccgcacggcctccgacatcttcggcctgccgccggacaaggtggaccgcgag
gcccggcgccgcgccaagaccatcaatttcggcatcatctacggcatgtcggccttcggc
ctggccgcgcgcctgggcatcggccccggcgaggccaagggcatcatcgacgcctatttc
gcccagtatcccggcatccgcgccgagatggagcggctgaaggaggaagcccgcatcaac
ggcttcgcgctcacccccttcggccgcaagctctggatcgacggcatcacctccaaggac
atgtcccgccggggcaatgccgagcgcgcggccatcaacgcccccttccagggcggggcg
gccgagatcatcaagcgcgccatggtgcggatgcccaaggccctgaaggatgccgggctg
gacgccaagatgctgctgcaggtgcatgacgaactgctgttcgaagtgccgcaggggcag
ctcaccgccacctccgccgtggtgaagcaggtgatggaaagcgtggcggaactgcgcgtg
ccgctgcgggccgagatcgggcacggggcgaactgggcggaagcgcactga
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