Roseomonas marmotae: IAI58_00400
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Entry
IAI58_00400 CDS
T08030
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmt03032
]
IAI58_00400 (ihfB)
03036 Chromosome and associated proteins [BR:
rmt03036
]
IAI58_00400 (ihfB)
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_00400 (ihfB)
DNA replication proteins [BR:
rmt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IAI58_00400 (ihfB)
Chromosome and associated proteins [BR:
rmt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IAI58_00400 (ihfB)
DNA repair and recombination proteins [BR:
rmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IAI58_00400 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QTI79337
LinkDB
All DBs
Position
94786..95121
Genome browser
AA seq
111 aa
AA seq
DB search
MTKSELIAQLAAANPHLRQPDVELIVGTIFDEISAALARGDRVELRGFGAFSAKQRDPRT
GRNPRTGEAVEVASKAVPYFKPGKELRERVNGGPLQAPRRGAGGRSAAPAE
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatccgaattgatcgcgcagctggcggcggccaatccgcatctgcggcagccg
gatgtcgagctgatcgtgggcaccatcttcgacgagatcagcgccgccctggcgcgcggg
gaccgggtggagctgcgcggcttcggcgccttctccgccaagcagcgcgacccccgcacc
ggccgcaacccccgcacgggtgaggcggtggaagtggccagcaaggccgtgccctatttc
aagccgggcaaggaactgcgggagcgcgtgaatggcggcccgctgcaggcgccccgccgc
ggcgccggcggccgcagcgccgcgccggcggagtaa
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