Roseomonas marmotae: IAI58_02230
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Entry
IAI58_02230 CDS
T08030
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IAI58_02230 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_02230 (ung)
Enzymes [BR:
rmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IAI58_02230 (ung)
DNA repair and recombination proteins [BR:
rmt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IAI58_02230 (ung)
Prokaryotic type
IAI58_02230 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTI79648
LinkDB
All DBs
Position
complement(466363..467082)
Genome browser
AA seq
239 aa
AA seq
DB search
MTHPAWGTALAALPPCWREAIGDEFGAPYMDALADFLLAEREAGKTLFPPEPLVFAALLR
TPLQQVKAVILGQDPYHQPGQAMGLSFSVPKGVRIPPSLRNIHKELAGDCGIPAPDHGCL
THWADGGVLLLNTALTVEQGKAGSHARAGWHIFTDRVIQAVNARPGPVAFLLWGGHARKK
APMLDTGRHLVLESDHPSPLAAARAATSPCPFAGSRPFSRTNDFLRSHGRNGLIDWRLP
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccggcctggggcacggccctcgccgccctgccgccctgctggcgggaggcg
atcggcgacgagttcggcgcgccctacatggatgccctggcggatttcctcctggcggag
cgggaggcgggtaagaccctgttcccgcccgagccgctggtcttcgccgcgctgctgcgc
acgccgctgcaacaagtgaaggcggtgatcctgggccaggacccctatcaccagcccggc
caggccatgggcctgtccttctccgtgccgaagggggtgcgtatcccgccctccctccgc
aacatccacaaggaactcgcgggtgattgcggcatcccggcgccggaccatggctgcctg
acccactgggcggatgggggcgtgctgctgctcaacaccgccctgaccgtggaacagggc
aaggcgggcagccacgccagggcgggctggcacatcttcacggaccgggtcatccaggcc
gtcaatgcgcgacccggccccgtggccttcctgctctggggtgggcatgcccggaagaag
gcgccgatgctggataccggccggcacctggtgctggaatccgaccatccctcgcccctg
gcggcggcccgcgcggcgacgagcccgtgtcccttcgccggttcccgcccctttagccgg
acgaatgacttcctgcgcagccatggccggaacggcctgatcgactggcgcctgccctga
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