Roseomonas marmotae: IAI58_02875
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Entry
IAI58_02875 CDS
T08030
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmt03016
]
IAI58_02875
Enzymes [BR:
rmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IAI58_02875
Transfer RNA biogenesis [BR:
rmt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IAI58_02875
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QTI79763
LinkDB
All DBs
Position
607326..607994
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AA seq
222 aa
AA seq
DB search
MGRTLFAPLSSLAGTMIKLHRHDLPDGLDLGPVVAVDTETMGLNPHRDRLCLVQLSAGDG
TAHCVQIVPEALGGRGADCPNLKRLLANPDQIKLFHFARFDVAILRQALGVEVAPVRCTK
IAAKLVRTFTERHGLKDLLRDLLGVDISKQQQSSDWGAAELTPEQLTYAASDVLHLHALW
ARLEGLLRREGRLELAEACFRFLPARGQLDLLGYDDPDIFAH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcacccttttcgcgccactttcttccttggctggcaccatgatcaagctgcac
agacatgacctgccggatgggctggacctcggtcccgtcgtcgcggtggataccgagacc
atgggtctcaacccgcaccgggaccggctctgcctcgtgcagttatccgctggcgacggc
acggcgcattgcgtgcagatcgtgccggaagcgctgggcgggcgcggggccgattgcccc
aacctgaagcggctgctggccaaccccgaccagatcaagcttttccatttcgcgcgcttc
gacgtggctatcctgcggcaggcgctgggggtggaggtggcgccggtgcgctgcaccaag
attgccgccaagctggtccgcaccttcaccgagcggcacgggttgaaggacctgctgcgg
gatctgctgggagtcgatatctccaagcagcagcagagttccgactggggcgcggcggag
ctgacgccggaacagctgacctatgcggcctcggacgtgttgcatctgcacgcgctctgg
gcacggctggaagggctgctgcgccgcgagggccggctggaactggccgaggcctgcttc
cgcttcctgcccgcgcggggccagttggacctgttgggctatgacgacccggatatcttc
gctcattaa
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