Roseomonas marmotae: IAI58_06125
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Entry
IAI58_06125 CDS
T08030
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rmt
Roseomonas marmotae
Pathway
rmt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
IAI58_06125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmt03019
]
IAI58_06125
03009 Ribosome biogenesis [BR:
rmt03009
]
IAI58_06125
04131 Membrane trafficking [BR:
rmt04131
]
IAI58_06125
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmt04147
]
IAI58_06125
Messenger RNA biogenesis [BR:
rmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
IAI58_06125
Ribosome biogenesis [BR:
rmt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
IAI58_06125
Membrane trafficking [BR:
rmt04131
]
SNARE
SNARE associated proteins
Others
IAI58_06125
Autophagy
Aggrephagy
Other aggrephagy associated proteins
IAI58_06125
Exosome [BR:
rmt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IAI58_06125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_22
AAA_2
CDC48_2
AAA_14
AAA_33
IstB_IS21
TIP49
nSTAND3
AAA_28
AAA_18
RNA_helicase
AAA_3
NPHP3_N
Mg_chelatase
AAA_7
NACHT
ABC_tran
AAA_30
AAA_17
Sigma54_activat
PhoH
TsaE
AAA_24
NB-ARC
Parvo_NS1
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
QTI80322
LinkDB
All DBs
Position
complement(1292070..1294343)
Genome browser
AA seq
757 aa
AA seq
DB search
MADTEPKGAQVQVANARPEDVGTGVARVSRRVMQTLGLQPGGILEVIGQRHTAAIAINPY
PEDEDLEIIRLDGLQRANAGATAGERIEVRQAQIKPATRVTLAPAQKNLRLSGSGDALRR
TFMGRPMVSGDVISTSAYQRSSAGGMPDEFFRQFHDRQAYALQEIRLSVVGTSPKGIVRI
EPGTEIELLPQYVEPKETRRADVTYDDIGGLGSAVDQVREMVELPLRHPELFQRLGIDPP
KGVILHGPPGTGKTLLAKAVANESEASFFSIAGPEIMGSHYGESEQRLRDIFQDAGKRAP
SIIFIDEIDSIAPKREEARGEVERRIVAQLLTLMDGLEPRQNVVVIAATNRVDAIDEALR
RPGRFDREIVIGVPDQDGRRQVLAIHTRGMPLGEDVDLDALARMSYGFVGADLSALAREA
AMDTVRRALPQINLRDGIPPEVLAGMRVCRADFENALKRIQPSALREIMIQIPNVGWNDI
GGVGAAREQLREGVELPLRHPDSFRRLGIRPAKGFLLFGPPGTGKTLMAKAVAREANANF
IATKSSDLLSKWYGESEQQVTRLFARARQVAPTVIFIDEIDSLVPARGGGLGEPQVTERV
VNTILAEMDGLEELQGVVVIGATNRPNLLDPALLRPGRFDELVYVPVPDEEGRAQILRIQ
TQGMPLADDVDLAEIARRTQGYTGADLGDIVRRAGLSALRQDLGASVIGLAEFEKALAET
RASVTPEMEQQYEELRKNLKQQGPMRRRQIGFDIGSG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccgataccgaacccaaaggagcccaggtccaggtcgccaatgcgcggccggaggat
gtgggaacaggcgtcgcgcgcgtcagccgccgcgtgatgcagactctgggcctgcagccc
ggcgggatcctggaagtgatcggccagcgccacacggcggccatcgcgatcaatccttat
cccgaggacgaggatctcgagatcatccgcctcgacggcctgcaacgcgccaatgccggc
gccacggccggcgagcgcatcgaggtgcggcaggcgcagatcaagccggcgacgcgcgtg
accctagccccggcgcagaagaacctgcgcctctccggctccggcgacgccctgcggcgg
accttcatgggccggccgatggtgtcgggcgatgtcatctccacctccgcctaccagcgg
agcagcgcgggcgggatgccggatgagttcttccgccagttccacgatcgccaggcttat
gccttgcaggagatccggctgagcgtcgtcggcacctcgcccaagggcatcgtgcggatc
gagccggggaccgagatcgagctactgccgcaatatgtggagccgaaggagacccgccgg
gcggatgtcacctatgacgacatcggcggcctcggctccgccgtcgaccaggtgcgggag
atggtggagctgccgctgcggcatcccgagctgttccagcgccttggcatcgacccgccg
aagggtgtcatcctgcatggcccgccgggcactggcaagacgctgctggccaaggcggtc
gccaatgaatccgaagcctccttcttcagcatcgccggcccggagatcatgggcagccat
tacggcgaatccgagcaacgtctgcgcgacatcttccaggatgccggcaagcgggcgccc
tccatcatcttcatcgacgagatcgacagcatcgccccgaagcgggaggaggccaggggc
gaggtggaacgccgcatcgtcgcgcagctgctgacgctgatggacgggctggagccgcgc
cagaacgtggtggtcatcgccgccaccaaccgagtcgacgccatcgatgaggcactgcgc
cggcccggccgcttcgaccgcgagatcgtcatcggcgtgccggaccaggacgggcggcgg
caggtgctggccatccatacccgcggtatgccgctgggcgaggatgtcgatctcgatgcc
ctggcgcgcatgagctacggcttcgtcggcgccgatctttcggccctggcgcgggaggcc
gccatggacacggtgcgccgcgccctgccgcagatcaatctgcgcgatggcatcccgccg
gaagtgctggcgggcatgcgtgtctgccgcgcggatttcgagaatgcgctgaagcgcatc
cagccttccgcgctgcgcgagatcatgatccagattccgaatgtcggctggaacgatatc
ggcggcgtcggcgcggcgcgcgagcagctgcgcgagggtgtcgaactgcccctgcggcat
ccggattccttccggcgcctcggcatccgcccggccaagggcttcctgcttttcgggccg
cccggcacgggaaagacgctgatggccaaggccgtggcgcgcgaggcgaatgccaatttc
atcgccaccaaatcgtcggacctgctgtcgaagtggtacggggagtcggagcagcaggtc
acccgcctcttcgcgcgcgcccggcaggtggcgccgaccgtgatcttcatcgatgagatc
gacagcctggtaccggcacgcggcggcggactgggcgagccgcaggtgacggagcgggtg
gtgaataccatcctcgccgagatggacgggttggaggagcttcagggcgtggtggtgatc
ggcgccaccaatcgcccgaacctgctggacccggcgctgctgcggcccgggcgcttcgac
gagctggtttatgtccccgtgccggacgaggaaggccgggcgcagatcctgcgcatccag
acgcaaggcatgccgctggccgatgatgtggacctcgcggagatcgcgcgccgcacccag
ggctataccggcgcggatctgggcgacatcgtccgccgtgccggtctttctgccctccgt
caggatctcggcgcgtcagtgatcggcctcgccgagttcgagaaggcgctggccgagacg
agggcttctgtcacgccggagatggagcagcagtacgaggagctgcgcaagaacctgaag
cagcaaggtcctatgcggcggcggcagatcggcttcgatatcggcagcgggtaa
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