Roseomonas marmotae: IAI58_06920
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Entry
IAI58_06920 CDS
T08030
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAI58_06920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmt03019
]
IAI58_06920 (groL)
03110 Chaperones and folding catalysts [BR:
rmt03110
]
IAI58_06920 (groL)
03029 Mitochondrial biogenesis [BR:
rmt03029
]
IAI58_06920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmt04147
]
IAI58_06920 (groL)
Enzymes [BR:
rmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IAI58_06920 (groL)
Messenger RNA biogenesis [BR:
rmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IAI58_06920 (groL)
Chaperones and folding catalysts [BR:
rmt03110
]
Heat shock proteins
HSP60 / Chaperonin
IAI58_06920 (groL)
Mitochondrial biogenesis [BR:
rmt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IAI58_06920 (groL)
Exosome [BR:
rmt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IAI58_06920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IAI58_06920 (groL)
Exosomal proteins of breast cancer cells
IAI58_06920 (groL)
Exosomal proteins of colorectal cancer cells
IAI58_06920 (groL)
Exosomal proteins of bladder cancer cells
IAI58_06920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
QTI80466
LinkDB
All DBs
Position
1458977..1460620
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGAPARERMLRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELSDKFENMGAQMVREVASKQNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGV
DKAVTQIVAELQAKSRKITTSAEVAQVGTLSANGESEIGQMIAEAMEKVGNEGVITVEEA
KGIQTELDVVEGMQFDRGYVSPYFITNAEKMIAELENPYILIHEKKLSQLQPMLPLLETV
VQSGRPLIIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLETVTLAMLGQAKMVRIEKENTTIVDGAGEKADIQGRVEQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALL
RASLKLSDLKGLNNDEQVGIEIVRRAIQTPLKQIAENAGKDGAVIAGEVLRDDTYEYGYD
AQLDEYKDLVAAGIIDPTKVVRTALQDAASIAALLITTEAMIAEKPAKASAPAGGPGGMG
GMGDMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtgaagttcggcgcccccgcccgtgagcgcatgctgcgcggcgtg
gacatcctggccgacgccgtgaaggtgaccctgggccccaagggccgcaacgtcgtgatc
gacaagtccttcggcgcgccccgcatcaccaaggacggtgtgacggtcgccaaggaaatc
gagctgtccgacaagttcgagaacatgggcgcgcagatggtgcgcgaagtggcctcgaag
cagaacgacctggccggcgacggcaccaccaccgcgaccgtgctggcccaggccatcgtg
cgcgagggtgccaaggccgtggccgccggcatgaacccgatggatctgaagcgcggcgtc
gacaaggccgtgacgcagatcgtcgctgagctgcaggcgaagtcccgcaagatcaccacc
tccgccgaagtggcgcaggtcggcacgctgtccgccaatggcgagtccgagatcggccag
atgatcgcggaagcgatggagaaggtcggcaacgagggcgtcatcacggtcgaggaagcc
aagggcatccagaccgagctggacgtcgtcgagggcatgcagttcgaccgcggctacgtc
tccccgtatttcatcacgaatgcggagaagatgatcgccgagctcgagaacccctacatc
ctgatccacgagaagaagctgtcccagctgcagccgatgctgccgctgctggagacggtg
gttcagtcgggccgcccgctgatcatcgtggccgaggacgtggaaggtgaggcgctggcc
accctggtggtcaacaagctgcgcggtggcctgaagatcgccgccgtgaaggccccgggc
ttcggtgaccgccgcaaggcgatgctggaagacatcgcgatcctgaccggtggccaggtc
atcagcgaggatctcggcatcaagctcgagaccgtgacgctcgccatgctcggccaggcc
aagatggtccggatcgagaaggagaacaccacgatcgtcgacggtgccggcgagaaggcc
gacatccagggccgcgtggagcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgtgagaagctgcaggagcgcctggcgaagctggctggcggcgtggccgtcatccgc
gtcggcggctccaccgaggtcgaggtgaaggagcgcaaggaccgcgtcgacgacgcgctg
catgcgacccgcgccgcggtcgaggaaggcatcgttcccggtggtggcgtggccctgctg
cgcgcttccctgaagctgtccgacctcaagggcctgaacaacgacgagcaggtcggcatc
gagatcgtgcgccgcgcgatccagacgccgctgaagcagatcgctgagaacgcgggcaag
gacggcgccgtgatcgccggtgaagtcctgcgcgacgacacctacgagtatggctacgac
gcccagctcgacgagtacaaggacctggtggccgccggcatcatcgacccgaccaaggtc
gtccgcacggctctgcaggacgcggcctccatcgcggccctgctgatcaccaccgaggcg
atgatcgccgagaagccggccaaggcttctgctccggccggtggcccgggcggcatgggc
ggcatgggtgacatggacttctga
DBGET
integrated database retrieval system
