KEGG   Roseomonas marmotae: IAI58_07480
Entry
IAI58_07480       CDS       T08030                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rmt  Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:rmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rmt03016]
    IAI58_07480 (thpR)
Enzymes [BR:rmt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     IAI58_07480 (thpR)
Transfer RNA biogenesis [BR:rmt03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    IAI58_07480 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS HVSL
Other DBs
NCBI-ProteinID: QTI80562
LinkDB
Position
complement(1585702..1586271)
AA seq 189 aa
MVRLFVALPIDDGTRDELAGLAGGIPGARWVPPENYHLTLRFIGEVENVLADELDEALAT
IRAKPFELKLRGVNVFEKAGRIHSLYAGVERCERLSHLQSKVETALQRAGLPPERKKFAP
HVTLARTEKAAPDKLIAFVQAHNLFRAPPQPVNHFSLYSSRLGKEQAHYVAEVDYALEGA
SLAARAAEH
NT seq 570 nt   +upstreamnt  +downstreamnt
atggtgcgcctgttcgtggccctgcccatcgacgacggcacgcgggatgagttggccggc
ctggccggcggcattcccggcgcccgctgggtaccgcccgagaactaccacctgaccttg
cgcttcatcggcgaggtggagaatgtgctggccgatgagctggacgaagccctggccacc
atccgcgccaagcccttcgagctgaagctgcgcggcgtgaatgtcttcgagaaggccgga
cgcatccattccctctacgcgggggtggagcggtgcgagcgcctttcccacctgcaatcg
aaggtggagacggcattgcagcgtgccgggctgccgccggagcgcaagaaattcgccccg
catgtcacgctggcacggaccgagaaggcggcgccggacaagctgatcgccttcgtgcag
gcgcataacctcttccgcgccccgccccagccggtgaaccacttcagcctctattcctcc
cgcctcgggaaggaacaggcgcattacgtggcggaggtggattacgcgctggagggagcg
agccttgccgccagggctgcggagcattag

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