Roseomonas marmotae: IAI58_09575
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Entry
IAI58_09575 CDS
T08030
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt00061
Fatty acid biosynthesis
rmt00071
Fatty acid degradation
rmt01100
Metabolic pathways
rmt01212
Fatty acid metabolism
rmt02024
Quorum sensing
rmt04146
Peroxisome
Module
rmt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IAI58_09575
00071 Fatty acid degradation
IAI58_09575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IAI58_09575
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAI58_09575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmt01004
]
IAI58_09575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmt04147
]
IAI58_09575
Enzymes [BR:
rmt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IAI58_09575
Lipid biosynthesis proteins [BR:
rmt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IAI58_09575
Exosome [BR:
rmt04147
]
Exosomal proteins
Exosomal proteins of breast milk
IAI58_09575
Exosomal proteins of breast cancer cells
IAI58_09575
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QTI77984
LinkDB
All DBs
Position
complement(2024707..2026413)
Genome browser
AA seq
568 aa
AA seq
DB search
MALEENWNSLPGMMLSLARRWPERSMLRFWREGAWREMSWAEYAMAVAAIAAGLRRRGVS
PGDRVLIVSENRPEFLIADTAIMAIGAVSVPTYTTNAVEDHAHILRDSGARTAIVSTPRL
ARMVAEAAGIGGLDLLVAMEDAENTVPWAELASTPPDLAMLVAEVDHIPPGRLACLIYTS
GTGGAPKGVMLPHRAMLANRHGVASFIGKLNLPADACYLSFLPLSHAYEHTVGGFLLPSF
GIQVVYSRGADRLAAELQSLRPAVLTAVPRLFEVLRARILAGLEKESPFRRRMFEAALRL
GLRKLDGPSLSPWEQLQDAVLEHLVRRKVRARFGGRMVALVSGGARLDPGLSGFFIALGL
PLIQGYGQTEAGPVISVNVPWDNRRHTVGKVLDGVEARIAADGEVLVRGDLVMDGYWNNP
EATAKALLDLRDGGAPWLHTGDLGEISQGYLRITDRKRDIIKTSGGDMVSPAKIEGMLMA
EPEIALAVVAGEGRPAIAALLVPAEGQEDRVPDAVARVNARLSSVERVRHSLVVPPFTVE
NGMLTPTMKIRRRAVLEAHAAALDRLYA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggaggagaactggaacagcctgccgggcatgatgctcagcctggcgcgccgc
tggccggagcggtcgatgctgcgcttctggcgcgagggcgcctggcgggagatgagctgg
gcggaatacgccatggccgtggccgccatcgccgccgggctgcgccggcgcggcgtctca
ccgggcgaccgcgtgctcatcgtctccgagaaccggccggaattcctgatcgccgacacc
gccatcatggccatcggcgccgtgtccgtgcccacctacaccaccaatgcggtggaggac
cacgcgcatatcctgcgcgattccggcgcccgcaccgccatcgtctccaccccccgcctg
gcccgcatggtggccgaggcggcggggatcggcgggctggacctgctggtggccatggag
gacgccgagaataccgtcccctgggcggagctggcctccacgccgcccgacctcgccatg
ctggtggccgaggtggaccatatcccgccggggcggctggcctgcctgatctacacctcc
ggcaccggcggcgcgcccaagggggtgatgctgccgcaccgggccatgctggccaatcgg
cacggggtcgccagcttcatcggcaagctgaacctgccggcggatgcctgctacctttcc
ttcctgccgctctcccacgcctatgagcatacggtgggaggcttcctgctgccctccttc
ggcatccaggtcgtctacagccgcggcgccgaccgcctggcggccgagttgcagagcttg
cgccccgccgtgctgacggccgtgccccgcctcttcgaggtgctgcgggcccgcatcctg
gccgggctggagaaggaatcgcccttccgccgccggatgttcgaggccgcgctgcgtctc
ggcctgcgcaagctggacggccccagcctcagcccttgggagcagttgcaggacgcggtg
ctggaacacttggtgcgccgcaaggtgcgggcgcgcttcggcgggcggatggtcgcgctg
gtctcgggcggcgcgcggctagaccccggcctctccggcttcttcatcgcgctgggcctg
ccgctgatccagggctatggccagaccgaggccgggccggtgatcagcgtcaatgtgccc
tgggacaaccgccggcataccgtgggcaaggtgctggacggcgtcgaggcccgcatcgcc
gccgatggcgaggtgctggtgcgcggcgacctggtgatggacggatactggaacaacccg
gaggccacggccaaggcgctgctggacctgcgcgacggcggcgccccctggctgcatacc
ggcgacctgggggagatctcccagggctaccttcgcatcaccgaccgaaagcgggatatc
atcaagacctcgggcggggacatggtcagcccggccaagatcgagggcatgctgatggcg
gagccggaaatcgccctcgccgtggtggcgggcgaaggccgccccgccatcgccgcgcta
ctggtaccggccgaggggcaggaggacagggtgcccgacgctgtggcacgggtgaatgcg
cgcctctcctcggtcgagcgggtgcgccacagcctggtggtgccgcccttcaccgtcgag
aacggcatgctgacgcccaccatgaagatcaggcgccgcgcggtgctggaagcccatgcg
gcggcactggacaggctctacgcctga
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