KEGG   Roseomonas marmotae: IAI58_09800
Entry
IAI58_09800       CDS       T08030                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rmt  Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:rmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmt03400]
    IAI58_09800
Enzymes [BR:rmt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IAI58_09800
    5.6.2.6  RNA 3'-5' helicase
     IAI58_09800
DNA repair and recombination proteins [BR:rmt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IAI58_09800
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: QTI78020
LinkDB
Position
complement(2071357..2073879)
AA seq 840 aa
MRTLPEPFAAWFAARGWRPRPHQLEMLAAAEAGESALLIAPTGGGKTLAGFLPSLIQLHR
NPRPGLHTLYVSPLKALAVDIARNLTIPAQEMGLDIRIETRTGDTPANRRSRQRADPPQI
LLTTPESLTLLLSLPDAAEMFGGLECVVIDEIHALAGTRRGDQLALCLSRLSALAPRMRR
VGLSATVAHPRALAAWCARNADPDAVRLVRVSGGAAPELSILLPAGRLPWGGHMGLTSMP
EVYEHLRQAGVSIVFTNTRAQAELCFQALWRLNEDNLPIALHHGSLTVEQRRKVEAAMAA
GRLRAVVATASLDLGIDWGAVDQVIQVGAPKGVARLLQRVGRANHRMDEPSRAVLVPANR
FEVVECRAAIDAVAAGEVDGEPPRPGGLDVLAQHILAMACHGPFFPDDLFAEIRSAAPYA
ELSRKDFEDTLRFVEDGGYALSGYERFRRLFRDYEGRVHVRGPQVARQLRMNLGTIVETP
LLKVRMRGGPILGEVEEWFVSTLEPGDNFIFAGQVLRYERLDPTAVIVSRGGEGEPRVPA
YAGARMPLTTWLARRVREILSNPRRWRGLPPSVREWLAMQRHRSELPPLDGLLVEVFPRG
NRWFLVAYCFEGRLAHQTLGMLVTRRMERMGLGPLGFLGTDYVMAVWSAFEPTDVGHLFE
EDLLGEELEEWIAESSMLRRTFRNIATVAGLLEKNHPGQEKSGRQMTMSADLIYDVLRKH
EPDHVLLRATRAEAAFGLTDVARIGTLLARVRGRIRVRRLEQVSPLAVPALIEEGREWVS
GSAEDALLAEAVALVDEATGGEESFTGDLGLDALPPVPPPPREARPRKARFIRHMRRNTG
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgcgaacattaccggaacctttcgcggcctggttcgccgcgcgcggctggcggccccgg
ccgcatcagcttgagatgctggccgcggccgaggcaggggaaagcgcgctgctgatcgcg
ccgacgggtggcggcaagaccctcgccggctttttgcccagcctgatccagctgcaccgc
aacccccgccccgggttgcacacgctctacgtctccccgctgaaggcgctggcggtcgat
attgcccgcaacctcaccattcccgcgcaggagatggggctggatatccgcatcgagacg
cgcaccggcgatacccccgccaatcgccgcagccgccagcgcgcggacccgcctcagatc
ctgctgaccacgccggaaagcctgaccctgctgctctccctgcccgatgcggcggagatg
ttcggcgggctggaatgcgtggtgatcgacgagatccatgccctggccggcaccaggcgg
ggggaccagctggcgctctgcctctcccgcctctcggcgctggcgccgcgcatgcggcgg
gtcgggctttccgccacggtcgctcatccccgcgccctggccgcctggtgcgccaggaat
gccgaccccgatgccgtgcgactggtgcgggtatccggcggcgcggcgccggagctttcc
atcctgctgccggccggacggctgccctggggcgggcatatgggcctgaccagcatgccg
gaggtctatgagcacctgcggcaggccggggtcagcatcgtcttcaccaatacccgcgcc
caggcggagctgtgcttccaggccctctggcggctgaacgaggacaatctgcccatcgcc
ctgcaccacggctcgctgacagtggagcagcggcgcaaggtggaggccgccatggcggcg
gggcggttgcgtgccgtagtcgccaccgcctcgctcgacctcggcatcgactggggcgcg
gtggatcaggttatccaggtaggcgcgccgaagggcgtggcgcggctgttgcagcgtgtg
ggccgcgccaatcaccggatggatgagccctcccgcgccgtgctggtgccggccaatcgc
ttcgaggtggtggaatgccgcgccgccatcgatgccgtggcggccggcgaggtggatggc
gagccgccccggcccggcggtctggacgtgctggcgcagcacatcctggccatggcctgc
cacggccccttcttccccgacgatctcttcgccgagatccgcagcgccgcgccctatgcc
gaactctcccgcaaggatttcgaggacacgctgcgcttcgtggaggacgggggctatgcc
ctctccggctatgaacgcttccggcggctgttccgtgactatgagggccgggtgcatgtc
cgtggcccgcaggtggcgcggcagctccgcatgaatctcggcacgatcgtcgagacgccg
ctgctgaaggtgcggatgcgcggcggcccgatactgggcgaggtggaggagtggttcgtc
tccaccctggagcccggcgacaacttcatcttcgccgggcaggtgctgcgctacgagcgg
ctggaccccacggccgtcatcgtctcccgcggcggcgaaggggagccgcgcgtgcccgcc
tatgccggcgcccgcatgccgctgaccacctggctggcgcggcgggtgcgggagatcctc
tccaatccccgccgctggcgcggcctgccgccgtcggtgcgggaatggctggccatgcag
cgccaccgctccgagctgccgccgctggacgggctgctggtcgaggtcttcccgcgcggc
aaccgctggttcctggtggcctactgcttcgaggggcggctggcgcatcagacgctcggc
atgctggtcacgcgccggatggagcggatggggctggggccgctgggcttcctcggcacc
gattacgtcatggccgtctggtccgccttcgagcccacggatgtcgggcacctgttcgag
gaggatctgctgggcgaggagctggaggaatggatcgcggaaagctccatgctccgccgc
accttccgcaatatcgccaccgtcgccgggctgctggagaagaaccatccgggccaggag
aaatccggccggcagatgaccatgtcggcggacctgatctacgacgtgctccgcaagcat
gagcccgaccatgtcctgctgcgggccaccagggctgaggccgccttcggcctgaccgat
gtcgcgcgtatcggcaccctgctggcccgggtcagggggcgcatccgcgtccgccggctg
gaacaggtctcgccgctggcggtgccggcgctgatcgaggaaggccgggaatgggtctcc
ggcagcgccgaggacgccctgctggccgaagccgtggccctggtggatgaggcgaccggt
ggcgaggagagcttcacgggcgatctcggcctcgacgccctgcccccggtgccgccaccg
ccccgcgaggcccgcccacgcaaggcccgcttcatccgccacatgcgccggaacacaggg
taa

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