Roseomonas marmotae: IAI58_10180
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Entry
IAI58_10180 CDS
T08030
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmt01002
]
IAI58_10180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmt01011
]
IAI58_10180
Peptidases and inhibitors [BR:
rmt01002
]
Cysteine peptidases
Family C82
IAI58_10180
Peptidoglycan biosynthesis and degradation proteins [BR:
rmt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IAI58_10180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QTI78093
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Position
2146153..2147727
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AA seq
524 aa
AA seq
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MRRRDICLSLLASALPLPALGAGPVRVQAVQPGWEALLRLSARLRALDQDGLNPSHYAIP
ADSRASGDPQGYTSALYAAALVALGDLLQGRVRGLPGRPDLRRDTVPMAAWQARLYGSAE
PAEVIEQAALLPPGMAVLRQGLMEARALVAAGGWPKVPMGTGTIEPGAVDPERVPALRAR
LAAEDPELAATTPFDPEIYDDPLLYAVRRWQSANALEPDGRVGPATLRLLNRPAEQRLTQ
IRVAMDMRRAMPRPQPGRRVEVNVPEYRLRVLEGEKRLLDMAVIVGKPARATPMLAVTMT
TVQFNPPWGVPERNAREDLLPKFRRDPRAMIEKGFRVYQYVGGERVEIDPLTVNWAAVNP
ERVPYIFRQDAGDSNALGRIKFIMPNSDDIYLHDTPDRHLFNRASRAFSSGCIRLERPME
LLDIVLNGTPDWDRARANRVLESRQTTAVGLRRPLPVRLSYQTVTIEQGKMRLYSDIYGL
DAAYAKALDQRGNTGAPLLTTGVPRLQPEAPARAEKLSGAVVVR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgacgtgatatctgcctgtcgctcctggcttccgccctgccgctcccggcactg
ggagccggccctgtccgcgtgcaggccgtacaaccgggatgggaagccctgttgcgcctc
tcggcacggctgcgggcgctggatcaggatgggctgaacccgtcgcattatgcgatcccc
gccgatagccgcgcatcgggcgacccgcagggctatacctccgcgctttatgccgccgcc
ctggtagcgctgggcgacctgctgcagggccgtgtgcgcggcctgcccggccgcccggac
ctgcggcgggacacggtgcccatggccgcatggcaggcccggctctatggcagcgccgaa
ccggccgaggtgatcgagcaggcggccttgctgccgccgggcatggcggtcctgcgccag
ggattgatggaggcccgcgccctcgtcgccgccggtggctggccgaaggtgcccatgggc
accggaaccatcgagccgggagcggtggacccggagcgggtgccggcgctgcgtgcccgg
ctggcggccgaggacccggagctggcggcgacgacgcccttcgacccggagatttacgac
gaccccctgctctatgcggtgcggcgctggcagagcgccaacgcgctggagccggacggc
cgcgtcggccccgcgacgctgcgcctgttgaaccgcccggccgagcagcgcctcacccag
atccgggtggcgatggatatgcggcgtgccatgccgcgtccgcagcctggccgccgggtg
gaagtgaacgtcccggaataccggctgcgcgtgctggaaggggagaagcggctgctggac
atggcggtgatcgtcggcaaacccgcacgcgccacgccgatgctggcggtcaccatgacc
acggtgcagttcaacccgccctggggcgtgccggagcgcaatgcgcgggaagacctgctg
ccgaagttccgccgcgatccccgcgcgatgatcgagaagggcttccgcgtctaccagtat
gtgggcggagagcgggtggaaatcgatccgctcaccgtcaactgggcggcggtcaatcct
gaacgcgtcccttatattttccgccaggacgccggcgattccaacgctctcggccgtatc
aagttcatcatgcccaatagcgatgacatctatctgcacgatactccggaccgccatctc
ttcaaccgggcgagccgtgccttctcctccggttgcatacggttggagcgccccatggaa
ttgctggatattgtgctcaacggcactccggactgggatcgcgcccgcgcgaacagggtc
ctggaatcgaggcagaccaccgcggtcggcctacgccgcccccttccggtgcgcctctcc
tatcagacagtgacgatcgaacagggcaaaatgcggctctattccgacatctacgggctc
gacgcggcctatgccaaggcgctggaccagcgtggcaacaccggtgcgccgctgctgaca
acgggtgttccgcgcttgcagccggaagcgcccgcgcgggcggagaaactttccggtgcg
gtggtggtgcgttga
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