Roseomonas marmotae: IAI58_10665
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Entry
IAI58_10665 CDS
T08030
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IAI58_10665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_10665
Enzymes [BR:
rmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
IAI58_10665
DNA repair and recombination proteins [BR:
rmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IAI58_10665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTI78174
LinkDB
All DBs
Position
complement(2256070..2256591)
Genome browser
AA seq
173 aa
AA seq
DB search
MRDDEPVLPDLLRPGLRLVFCGSAPGAVSAARGAYYAHPGNRFWSILAEAGFTPGRWAPH
EYPRLLELGIGLTDLAKHASGNDADLPPDAYDVAGLERRIRAARPAMLAFTAKAPAAAFL
GRRTGAIGYGRVEGRLDFPPIWVLPSTSGSGARHWDPRPWLALGAWFKGEAPG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgagggacgacgaaccggtattgccggaccttctgcgccccggcctgcggctggtcttc
tgtggcagcgcgcccggcgcggtttcggcggcgcgtggggcctattacgcgcatcccggc
aaccgtttctggtcgatcctggcggaggcgggcttcacgcccgggcgctgggcaccgcat
gaatacccgcgcctgctggagctgggcatcggcctgacggacctggccaagcacgcatcc
ggcaatgacgccgacctgccaccggatgcctatgacgtggcggggctggagcggcgtatc
agggccgctcgcccggccatgctggccttcacggccaaggcaccggcggcggccttcctg
ggccgccgtaccggcgccatcggctatggccgggtggaagggcggctggattttccgccc
atctgggtgctgccttccacatccggctccggcgcacgccactgggacccgcgcccctgg
ctggcgctgggtgcctggttcaagggcgaggctccgggctag
DBGET
integrated database retrieval system
