Roseomonas marmotae: IAI58_10680
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Entry
IAI58_10680 CDS
T08030
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IAI58_10680 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmt03019
]
IAI58_10680 (rnc)
03009 Ribosome biogenesis [BR:
rmt03009
]
IAI58_10680 (rnc)
03036 Chromosome and associated proteins [BR:
rmt03036
]
IAI58_10680 (rnc)
Enzymes [BR:
rmt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IAI58_10680 (rnc)
Messenger RNA biogenesis [BR:
rmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IAI58_10680 (rnc)
Ribosome biogenesis [BR:
rmt03009
]
Eukaryotic type
90S particles
RNase
IAI58_10680 (rnc)
Prokaryotic type
rRNA processing factors
IAI58_10680 (rnc)
Chromosome and associated proteins [BR:
rmt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IAI58_10680 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QTI78177
LinkDB
All DBs
Position
complement(2258268..2258978)
Genome browser
AA seq
236 aa
AA seq
DB search
MAFRRPLEPAVHGGTVNTNFKERIGYSFVNPALLTHAMTHRSAADPRRDMLDSNERLEFL
GDRVLALVMAEWLSERFPQEREGALGKRLSVLVAAETLAKVGDAIGLPAALRIPPAEGRT
GLRGRATVIADATEALIGALYLDGGLEAARGFVRREWAGHIEADPTPPMSAKSRLQEYTL
GRAEGLPEYRLVSTTGPSHMPVFVVAVHAGGREAEGRGESKRAAEQAAAEAWLAGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccttccgccgtccgctggaaccggctgttcatggcggtacggtgaataccaacttc
aaggaacgcatcggctacagcttcgtcaatccggcgctgttgacgcacgccatgacgcat
cgttccgccgccgacccgcggcgggacatgttggattcgaacgagcggctggaattcctg
ggcgaccgcgtgctggcgctggtgatggccgaatggctctccgaacgcttcccgcaggag
cgggagggcgcgctgggcaagcggctttcggtgctggtggcggccgagaccctggcgaag
gtaggggatgccatcggcctgccggccgcgctgcgcatcccgcccgccgaagggcgcacg
gggctgcggggccgcgcgacggtgatcgccgacgcgaccgaggcgctgatcggcgccctc
tatctggatggcgggctcgaggccgcgcgtggcttcgtccgccgcgagtgggctggccat
atcgaggccgatccgacgccgccgatgtcggccaagagccggctgcaagagtatactttg
ggccgggcggaggggctgccggagtatcggctggtttccaccaccgggccctcccatatg
cctgtcttcgtggtggccgtgcacgccggtgggcgggaagcggagggccgcggcgaatcg
aagcgggcagccgagcaggccgccgccgaagcctggctggcaggactgtga
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