Roseomonas marmotae: IAI58_11695
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Entry
IAI58_11695 CDS
T08030
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmt03032
]
IAI58_11695 (topA)
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_11695 (topA)
Enzymes [BR:
rmt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IAI58_11695 (topA)
DNA replication proteins [BR:
rmt03032
]
Prokaryotic type
DNA Topoisomerases
IAI58_11695 (topA)
DNA repair and recombination proteins [BR:
rmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IAI58_11695 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
QTI78353
LinkDB
All DBs
Position
2470694..2473423
Genome browser
AA seq
909 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGHDFTVLASFGHVRDLPPKDGSVRPEEDFAMDWSSEDRGE
KQVAAIAKALKGATRLFLATDPDREGEAISWHVQEMLRQKGALKGIEVHRITFNEITKRA
VQYALEHPRDLDTPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEAFRPREYWTVEGKFLTVNGAPFTARLTHLGGKRLDQFDLPDEASAMRAKAAVEA
GAFSIASVEKKRVRRNPPPPFTTSTLQQESSRKLGFGAQQTMRLAQQLYEGVDIQGETVG
LITYMRTDGVQMAREAMFAIRDHVKDAFGAEYIPAAPREYSSKAKNAQEAHEAVRPTDVG
RTPEQVARFLTVEQRRLYELVWKRAVASQMQSAELDQTAVDVADKSGQVKLRATGSVIAF
DGFLKLYREDVDDAAGDDEEGRTLPPMRQDDPAKLGAAQADQHFTQPPPRYSEASLVKKM
EELGIGRPSTYASILQTLQDRDYVKLDKRRFMPEDRGRLVTSFLVSFFERYVDPHFTAGL
EEQLDDISGGRADWRAVMRAFWEEFNAAVAATKDLTISAVIDALDEELGPHFFPTPADGG
DPRACPSCSNGRLGLRLGRNGAFIGCSNYPECRYTRPLAVPGAEGDAEGGGLAGGVRELG
VDPVTGQDVTLRRGPYGVYVQLGEGGTDQKGKAIKPKRTSLARGMDPETLTLERGLALLS
LPRVIGLHPETGDEITAAIGRFGPYVKMGSIFKSLDKDDDVLSIGINRAVSLLADAAARV
RSLGPHPKDGEPVEVKKGRFGPFAQHAGMVASLPRDMTMEEITLDQAVALLAEKGKKLPP
RGKKGAAAKKAPARKAAATPAGDAAEKPKKAPAARKPASKAKTTATKKPVTKKPAAKKAP
AAKREKVKA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgtcgtcgtcgaatcgccggccaaggcgaagaccattaacaaatacctg
ggccatgacttcacagtcctggccagcttcggccatgtgcgcgacctgccgcccaaggat
ggcagcgtgcggcccgaggaagatttcgccatggactggtcctccgaggaccggggcgag
aagcaggtggcggccatcgccaaggctctgaaaggggcgacgcgcctcttcctggccacc
gacccggatcgcgagggcgaggccatctcctggcatgtgcaggagatgctgcggcagaaa
ggcgcgctgaaggggatcgaggtccatcggatcaccttcaacgagatcaccaagcgggcc
gtgcaatatgcgctggaacatccgcgtgacctcgatacgccgctgatcgaggcctatctg
gcgcggcgtgcgctggattacctggtgggcttcaccctctcccccgtgctctggcgcaag
ctgcccggcagccgctccgccgggcgcgtgcaatccgtcgcgctgcgcctgatctgcgag
cgcgaggctgagatcgaggccttcaggccgcgcgaatactggacggtcgagggcaagttc
ctgaccgtcaacggcgcgcccttcacggcgcggctgacgcatctgggcggcaagcggctg
gatcagttcgacctgccggacgaggccagcgccatgcgcgccaaggccgccgtcgaggcc
ggcgccttcagcatcgccagcgtcgagaagaagcgcgtccgccgcaatccgccgccgccc
ttcaccacctccacgctgcagcaggaatcctcgcgcaagctgggcttcggcgcgcagcag
acgatgcgcctggcacagcagctctacgagggcgtggacattcagggcgagacggtcggc
ctgatcacgtacatgcggaccgacggcgtgcagatggcgcgggaggcgatgttcgccatc
cgcgatcatgtgaaggacgcgttcggcgccgaatacatccccgcggcgccgcgcgagtat
tcctccaaggccaagaacgcccaggaagcgcatgaagccgtccgcccgaccgatgtgggc
cgcacgccggaacaggtggcgcgctttctcaccgttgagcagcgccgcctctacgagctg
gtctggaagcgtgccgtcgccagccagatgcagtcagccgagctggaccagacggcggtg
gatgttgccgacaaatccgggcaggtgaagctgcgcgccaccggcagcgtcatcgccttc
gacggcttcctgaagctgtatcgggaagacgtggacgacgcggccggcgatgacgaggaa
ggccgtacgctgccgccgatgcgccaggacgacccggcgaagcttggcgccgcgcaggcc
gaccagcatttcacccagccgccgccacgctattccgaggcctcgctggtgaagaagatg
gaggagctcggcatcggccgcccctccacctatgcctccatcctgcagacgttgcaggac
cgcgactatgtgaagctggacaagcgccgcttcatgccggaggaccgcgggcggctggtc
accagcttcctcgtgtccttcttcgagcgttacgtcgacccccatttcacggccgggctt
gaggagcagctggacgacatctccggcggccgggccgactggcgcgcggtgatgcgtgcc
ttctgggaggaattcaacgccgccgtcgccgctaccaaggacctgacgatcagcgcggtc
atcgatgcgctggacgaggagctgggcccgcacttcttccccactcccgcagatgggggc
gacccgcgtgcctgcccgagctgctccaatggcagactggggctgcgcctcggccgcaac
ggcgccttcatcggctgctccaactacccggaatgccgctatacccggcccctggccgtg
ccgggcgccgagggtgacgcggagggcggagggctggcgggcggcgtgcgtgagctgggc
gtggaccccgtgaccgggcaggacgtgacgctgcggcgtggcccctatggggtctatgtg
cagcttggcgaaggcggcaccgaccagaagggcaaggccatcaagccgaagcgcaccagc
ctggcgcgcggcatggacccggagacgctgacgctggagcgtggcctggcgctgctctcc
ctgccccgcgtgatcggcctgcaccccgagaccggcgacgagatcaccgccgccatcggc
cgcttcgggccctatgtgaagatgggcagcatcttcaagtcgctcgacaaggatgacgac
gtcctctcgatcggcatcaaccgcgccgtttccctgctggcggatgccgctgcccgggtg
cgctcgctcggcccccatcccaaggatggggagccggtcgaggtgaagaagggacgcttc
ggccccttcgcccagcatgccggcatggtggccagcctgccgcgcgacatgacgatggag
gagatcaccctcgatcaggccgtggcgctgctggccgagaagggcaagaagctgccgccc
cgtggcaagaagggcgcggcggccaagaaggctccggccaggaaggcggccgccaccccg
gccggggatgctgcggagaagccgaagaaggcgcccgccgcccgcaagccggcatcgaag
gccaagaccacggccacgaagaagcccgtcacaaagaagcctgccgccaagaaggcgccc
gcggccaagcgtgaaaaggtgaaggcctga
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