KEGG   Roseomonas marmotae: IAI58_12240
Entry
IAI58_12240       CDS       T08030                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rmt  Roseomonas marmotae
Pathway
rmt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rmt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IAI58_12240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rmt02022]
    IAI58_12240
Two-component system [BR:rmt02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   IAI58_12240
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 Mg_chelatase AAA DUF6716 AAA_7 AAA_16 MCM RTP1_C2
Other DBs
NCBI-ProteinID: QTI78453
LinkDB
Position
2587347..2588690
AA seq 447 aa
MTPIRVAFVDDDAELREANAQTLELDGLEPLPLASAAEALARIDAGFEGVVVSDIRMAGM
DGFQLFRRLHAMDADLPVILITGHGDIPMAVAAMKEGAYDFLAKPFEPGALLASIRRALE
KRRLVLENRRLRECVAAGEDGALLLGETPAMQRLRRTLRHIADADVDVLVVGETGTGKEV
VSSALHRWSRRTSRPFVALNCGALPETVIESELFGHEAGAFTGAHKRRVGRVEHSSGGTL
FLDEIESMPHSLQVKLLRVLETREITPLGTNETRALDLRVVAASKIDLAEAASRGEFRED
LFYRLNVVTLRLPPLRERRGDIPLLFAHFLARAAIRFRRPAPEMTPAVERHLLSHDWPGN
VRELSHFAERVALGLEALEDPAPREEGDAFSLPERMERYEAALISRALEANGGDVRNTLA
LLGIPRKTFYDKLARHGIDRSRYIRQE
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgacacccatccgcgtcgccttcgtcgatgatgacgccgagctgcgcgaggccaatgcg
cagactctggagctggacgggttggagcccctgcccctcgcctccgccgccgaggctctg
gcgcgcatcgacgcgggcttcgagggcgtggtggtcagcgacatccgcatggccggcatg
gacggcttccagctcttccgccgcctgcatgccatggatgccgacctgccggtgatcctg
atcaccggccatggagatatccccatggcggtcgcggcgatgaaggaaggtgcctacgac
ttccttgccaagcccttcgaacccggcgcgctgctggccagcatccggcgcgccctggaa
aaacgcaggcttgtcctggagaatcgccgcctgcgcgaatgcgtcgccgccggggaagac
ggtgcgctgctgctgggcgagaccccggccatgcagcgcctgcgccgcacgctgcgccat
atcgccgatgccgacgtggatgtgctggtggtgggcgagaccggcacgggcaaggaggtt
gtctcctccgccctgcatcgctggagccgccgcaccagccggcccttcgtcgcgctcaat
tgcggcgcgctgccggagacggtgatcgagagcgaattattcggccatgaggccggcgcc
ttcaccggagcgcacaagaggcgcgtcggccgcgtcgagcattccagcggcggcacgctc
ttcctcgacgagatcgagagcatgccgcattccctgcaggtgaagctgctgcgggtgctg
gagacgcgggagatcacccccctcggcaccaatgagacccgggcgctggacctgcgcgtg
gtggccgccagcaagatcgacctggccgaggccgcctctcgcggcgagttccgcgaggac
ctgttctaccgcctgaatgtcgtgacgctgcgtctcccgccgctgcgggagcgtcggggg
gacatccccctgctcttcgcgcatttcctggcccgcgccgccatccgcttccgtcgcccc
gcgccggagatgacccccgcggtggagcggcacctgctgagccatgactggcccggcaat
gtgcgcgaactctcccatttcgccgagcgcgtggcgctggggctggaagcgctggaagac
cccgccccgcgcgaggaaggcgacgccttcagcctgccggagcggatggaacgctacgag
gccgctctgatctcccgggcgctggaggccaacggcggcgatgtgcgcaacacgctcgcc
ctcctcggcatcccgcgcaagaccttctacgacaagctggcccggcatggcatcgaccgc
agccgctacattcggcaggaatga

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