Roseomonas marmotae: IAI58_12360
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Entry
IAI58_12360 CDS
T08030
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rmt
Roseomonas marmotae
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmt03032
]
IAI58_12360
03036 Chromosome and associated proteins [BR:
rmt03036
]
IAI58_12360
03400 DNA repair and recombination proteins [BR:
rmt03400
]
IAI58_12360
DNA replication proteins [BR:
rmt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IAI58_12360
Chromosome and associated proteins [BR:
rmt03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IAI58_12360
DNA repair and recombination proteins [BR:
rmt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IAI58_12360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
MmgE_PrpD_N
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QTI78473
LinkDB
All DBs
Position
2614164..2614433
Genome browser
AA seq
89 aa
AA seq
DB search
MSKAFLAQVIQDSIGCTGVAANQAAADLVASIVKEMKKKGGFTLPSFGTFTVRKTKARKG
MNPRTGEPVKIKAGKTVRFKASPNLKKAV
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagcattccttgcccaggtcatccaggactcgatcggctgcacgggcgttgcc
gccaatcaggccgcggccgacctggtcgcctccatcgtcaaggaaatgaagaagaagggc
ggcttcaccctgccgagcttcggcaccttcaccgtgcgcaagaccaaggcccgcaagggc
atgaacccccgcacgggtgagccggtgaagatcaaggctggcaagacggtgcgcttcaag
gcctcgccgaatctgaagaaggcggtctga
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integrated database retrieval system
