Roseomonas marmotae: IAI58_14420
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Entry
IAI58_14420 CDS
T08030
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt00541
Biosynthesis of various nucleotide sugars
rmt01100
Metabolic pathways
rmt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IAI58_14420 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rmt01005
]
IAI58_14420 (rfaD)
Enzymes [BR:
rmt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IAI58_14420 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rmt01005
]
Core region
IAI58_14420 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
KR
Pyr_redox
adh_short
Motif
Other DBs
NCBI-ProteinID:
QTI78833
LinkDB
All DBs
Position
3074144..3075136
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AA seq
330 aa
AA seq
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MYLVTGGAGFIGSNLVAALCARGEEVLVVDRLRAGDPGREKWRNLAHHNIAGILPPELLW
QWLEDSPPPRAILHLGAISDTTVRDGDLVAENNLSLTLRLFSWCAERGVPLIYASSAATY
GGGEQGFDDDASPETLAKLRPLNLYGWSKHATDRRIADLLARGRKAPPQWAGLKFFNVYG
PNEFHKGRMASVVLHKFRQIISGAPATLFRSDREGIADGEQLRDFVHVDDCVEVMLWLLD
NPRVSGLFNVGTGTARSFLDLTRAIYTALDKTPEITFVDMPVDLQGKYQYYTQARMDRLR
AAGFTGAATGLEEGVARYVQNFLTQPDPYV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtatctagtgactggcggtgccggtttcatcggctccaatctcgtcgccgccctctgc
gcgcgcggcgaggaagtcctggtcgtcgaccgcctgcgtgccggggatccggggcgcgag
aagtggcgcaacctggcgcatcacaacatcgccggcatcctgcccccggagctgctgtgg
cagtggctggaggatagcccgcctccgcgggccatcctgcatctgggcgccatcagcgat
accaccgtgcgcgacggcgacctggtggcggagaacaacctctccctgacgctgcgcctc
ttctcctggtgcgccgaacgcggggtgccgctgatctatgcctcctccgccgcgacctat
ggcggcggcgagcaaggcttcgacgacgatgcctcgcccgagaccctggcgaagctgcgg
ccgctcaacctctatggctggtcgaagcacgcgacggaccggcgcatcgccgacctgctg
gcacgtggccgcaaggcgccaccgcaatgggcggggctgaagttcttcaacgtctatggc
cccaatgaattccacaagggccgcatggccagcgtggtgctgcacaagttccgccagatc
atctccggcgccccggccacgctcttccgcagcgaccgcgagggcatcgccgatggcgag
cagctgcgcgacttcgtccatgtggatgactgcgtggaggtgatgctctggctgctggac
aatccgcgggtctccggcctgttcaatgtcggcaccggcaccgcccgcagcttcctggac
ctgacgcgcgccatctacaccgcgctggacaagacgcccgagatcaccttcgtcgacatg
cccgtcgatctgcaggggaagtaccagtattacacccaggcccgcatggaccggttgcgt
gccgccggcttcaccggcgccgcgacggggctggaggagggggtcgcgcgctatgtgcag
aacttcctgacccagcccgacccctacgtctga
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