Roseomonas marmotae: IAI58_19615
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Entry
IAI58_19615 CDS
T08030
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rmt
Roseomonas marmotae
Pathway
rmt00630
Glyoxylate and dicarboxylate metabolism
rmt00680
Methane metabolism
rmt01100
Metabolic pathways
rmt01120
Microbial metabolism in diverse environments
rmt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IAI58_19615 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
IAI58_19615 (fdhF)
Enzymes [BR:
rmt01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
IAI58_19615 (fdhF)
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Gene cluster
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Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer2
Fer4_9
Fer4
Fer4_21
Fer4_Nqo3
Fer4_6
Fer4_17
Fer4_10
Fer4_16
Fer4_2
Fer4_4
Fer4_15
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
QTI81546
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All DBs
Position
p1318-3:complement(210023..212794)
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AA seq
923 aa
AA seq
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MSEAIAFELDGTMVEAMPGETLWEAARRLGTEIPHLCHRPEPGYRPDGNCRACMVEIEGE
RVLAPSCMRKPTPGMKVRSASERAGRARRMVMELLLADQPARSASPDPSSRLWDWADRME
VVESRFPAVPRWAPDASHPAMRVNLDACIQCNLCVRACREVQANDVIGMAERNAAAKVVF
DFDDPMGASTCVACGECVQACPTGALMPAAYLDEQQVRKVWPDRSVDSLCPYCGVGCQVT
YQVKDDRIVYAEGRDGPANHNRLCVKGRFGFDYAQHPHRLTKPLIRRAEVPKHAEDQVDP
ANPWTHFREASWEEALELAAGGLARLRDTHGPKSLAGFGSAKGSNEEAYLFQKLVRTGFG
SNNVDHCTRLCHASSVAALMEGLNSAAVTAPFAAALEAEVIVVIGANPTVNHPVAATFIK
NAVKQRGARLVVIDPRRQQLSRHAAHHLAFRPGSDVALLNALLHTIIEEELYDRQYVDAH
TEGFAELRERIRDFPPERMEAVCGVPAATLREVARLYARARTAIIFWGMGISQHVHGTDN
SRCLIALALITGQIGRPGTGLHPLRGQNNVQGASDAGLIPMVLPDYQPVAKPEIRTAFER
FWGATLDPEPGLTVVEIMNAIHAGTIRGMYIEGENPAMSDPDLRHAREALAKLDHLVVQD
LFLTETAFHADVVLPASAFAEKSGSFTNTDRRVQLARPVVPLPGQARQDWWIIQEMARRL
GLDWDYAGPAAVFAEMAQIMPSFANITWERLEREGAVTYPVDSPDKPGNEILFARGFPTD
SGRARLVPAHIVPPDEVPDAEYPMVLSTGRVLEHWHTGSMTRRSDVLDLLEPEAVALLSP
TDLRRLDLGAGERVRLETRRGAVELKIRADRDVPAGMVFLPFCYAEAAANLLTNPALDPF
GKIPEFKFCAVRVGRPVPAEAAS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggccattgccttcgaactggacggaacgatggtcgaggccatgccgggcgag
acgctctgggaagcggcgcggcgcctcggcaccgagatcccgcatctctgccacaggccc
gagccgggctaccggcccgacggcaattgccgcgcctgcatggtggagatcgagggggag
cgtgtcctcgccccttcctgcatgcgcaagccgacgccggggatgaaggtgcgcagcgcc
agcgaacgcgccgggcgtgcccgccggatggtgatggaactgctgctggcggaccagccg
gcgcgttcggcctcgccggacccgagttcccgcctctgggattgggcggaccgcatggag
gtggtggagagccgcttcccggccgtgccgcgctgggcgcccgatgccagccatccggcg
atgcgcgtcaatctcgacgcctgcatccagtgcaacctctgcgtccgcgcctgccgcgag
gtgcaggccaatgacgtcatcggcatggcggaacgcaatgccgccgccaaggtggtcttc
gatttcgacgacccgatgggcgcctccacctgcgtcgcctgtggcgaatgcgtgcaggcc
tgcccgaccggcgcgctgatgcccgccgcctatctggatgagcagcaggttcgcaaggtc
tggcctgaccgcagcgtggattcgctctgtccctattgcggcgtcggctgccaggtcacc
tatcaggtgaaggacgaccgcatcgtctatgccgagggccgcgacgggccggccaaccac
aaccggctctgcgtcaaggggcgcttcggcttcgactacgcgcagcacccgcaccggctg
acgaagccgctgatccgccgtgcggaggtgccaaagcacgctgaagaccaggtggacccc
gccaatccctggacccatttccgcgaggcgagctgggaagaagcactggagttggccgca
ggcggtctggcccggctgcgggatacgcatgggccgaagtccctggccggattcggctcg
gccaagggatcgaacgaggaagcctatctcttccagaagctggtccgcacgggcttcggc
agcaacaatgtcgatcactgcacgcggctttgccacgcttcctccgtcgccgcgctgatg
gaagggctgaactcggccgcggtgacggcgcccttcgccgccgcgctggaggccgaggtg
atcgtggtgatcggcgccaaccccacggtgaaccacccggtcgcggccaccttcatcaag
aatgcggtgaagcagcggggcgccaggctggtggtgatcgatccgcgccgccagcagctc
tcccgccacgcggcccatcatctggccttccgtccgggcagcgacgtcgcgctgctgaac
gcgctgctgcacacaatcatcgaggaggaattgtacgaccgccagtatgtcgatgcccat
accgagggcttcgccgaattgcgcgagcgcatccgggatttcccgccggagcggatggag
gcggtctgcggcgtccccgccgccacgctgcgcgaggtggcgcggctctatgcccgcgcg
cgcaccgcgatcatcttctggggcatgggcatcagccagcatgtgcatggcaccgacaat
tcccgctgcctgatcgcgctggctctgatcaccgggcagatcggccggcccggcaccggg
ctgcacccgctgcgcgggcagaacaacgtgcagggcgcatccgatgccgggctgatcccg
atggtgctgccggattaccagccggtggcgaagccggagatccgcaccgccttcgagcgt
ttctggggcgcgacactggacccggagccggggctgacggtggtggagatcatgaacgcc
atccatgccggcaccatccgcggcatgtatatcgagggcgagaaccccgcgatgtccgac
ccggacctgcgacatgcgcgcgaggccctggcgaagctcgaccatctcgtggtgcaggac
ctcttcctgaccgagaccgccttccatgccgatgtggtgctgcccgcctcggccttcgcc
gagaagtccggcagcttcaccaataccgaccgccgcgtgcagcttgcccgcccggtggtg
ccgctgccggggcaggcgcggcaggactggtggatcatccaggagatggcccgccgcctg
ggcctcgactgggattatgcggggccggcagcggtcttcgcggagatggcgcagatcatg
ccatccttcgccaatatcacctgggaacggctggagcgcgaaggcgcggtgacctatccc
gttgattcgcccgacaagcccggcaatgagatcctcttcgccaggggcttcccgaccgac
agcgggcgcgcccgcctggtccccgcgcatatcgtgccgcccgacgaagtgccggatgcc
gaataccccatggttctttccaccgggcgggtgctggagcactggcacaccggctccatg
acccgccgctccgatgtgctggacctgctggagcctgaggccgtggcgctgctctcgccc
accgacctgcgccggctggatctcggcgccggcgagcgcgtgcggctggagacgcggcgc
ggcgcggtggaactgaagatccgcgcggaccgcgacgttcccgcgggcatggtgttcctg
cccttctgctatgccgaggcggcggccaacctgctgaccaacccggcgctcgaccccttc
ggcaagatcccggaattcaagttctgcgcggtgcgggtcggccggccggtccccgccgag
gccgcgtcatga
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