Roseomonas marmotae: IAI58_19965
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Entry
IAI58_19965 CDS
T08030
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rmt
Roseomonas marmotae
Pathway
rmt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAI58_19965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmt02000
]
IAI58_19965
Transporters [BR:
rmt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IAI58_19965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QTI81609
LinkDB
All DBs
Position
p1318-3:288966..290006
Genome browser
AA seq
346 aa
AA seq
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MTIITRRGALGLGAMAGLGLARPHLARAQGRSITVTALGGVWEEAVRSCFAEPYEKQTGN
TARVLIGSPPQWLAQIEANPARPPIDAMVTIPDLAIAAVKNGLMDRFTAEKTPNIVHTPR
QFIDPLDDCGVMFDYGVAGFTYNKDRIKQPPKSFVEFVDRTARGEWQASLPGIGYAVTPI
MLIWAMARALGGGVDNVDPFFDAMRKMRRNVIFWNSPNDFESALATGDAEIGIYFDGRTW
AWWDSGAKFAGFLNPSEGGSINAIAVQKPKNASEAVWPYLDIMLSAGAQLNFAKMLNYGV
TNSQVVYPPELAARITPWQEAALPPYAEIAEKRAAWVDRWNREIGR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcacacggcgcggcgcactgggccttggcgccatggccgggctggggctt
gcccggccccacctggcacgggcgcagggcaggagcatcaccgtcaccgccctgggcggc
gtctgggaggaagcggtgcgaagctgcttcgccgaaccctacgagaagcagaccggcaat
accgcgcgcgtgctgatcggcagcccgccgcaatggctggcgcagatcgaggcgaacccg
gcccgcccgccgatcgacgccatggtcacgatccccgacctcgccatcgccgcggtgaag
aacgggctgatggaccgcttcacggccgagaagacgcccaacatcgtccatacgcccagg
cagttcatcgatccgctggatgactgcggcgtgatgttcgactacggcgtggcgggcttc
acctacaacaaggatcgcataaagcagccgccgaaatccttcgtggaattcgtcgaccgc
acggccaggggcgaatggcaggcctccctgcccggcatcggctatgccgtgacgccgatc
atgctgatctgggccatggcgcgcgcgctgggcggcggcgtggacaatgtggaccccttc
ttcgacgccatgaggaagatgcgccgcaacgtcatcttctggaacagcccgaacgacttc
gaaagcgcgctggcgacgggcgatgcggaaatcggcatctatttcgacggccgcacctgg
gcctggtgggacagcggcgccaaattcgcgggcttcctgaatccctcggagggcggctcg
atcaatgccatcgccgtgcagaagccgaagaatgccagcgaggccgtctggccctatctg
gacatcatgctgagcgccggggcgcagctgaacttcgcgaagatgctcaactacggcgtg
accaacagccaggtggtctatccgccggagctggcggcgcgcatcacgccctggcaggag
gccgcgctgccgccatatgccgagatcgccgagaagcgcgcggcctgggtggaccgctgg
aatcgcgagatcggccgctga
DBGET
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