Roseomonas marmotae: IAI58_21055
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Entry
IAI58_21055 CDS
T08030
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rmt
Roseomonas marmotae
Pathway
rmt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAI58_21055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmt02000
]
IAI58_21055
Transporters [BR:
rmt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IAI58_21055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QTI81839
LinkDB
All DBs
Position
p1318-4:119730..120782
Genome browser
AA seq
350 aa
AA seq
DB search
MTRWIGAMLGVASLAAAAVPAAAQGNGQITVMAYGDAVFRDNYIATVVEPFQKASGTQVQ
YFANPGSAQMLGTLRAQKGDPQVDVVIMDTTTAALACAEGLVEKVAPAQMPVLNDIAQQA
RDAGGECGPGVTFDNLVMIYNTENVKTTPTGFADMADPQWRGRVGLGGPPNIQGLALTAI
LANANGGKWNDISKALPALKAIAANTQTFDPKPDAVTIVMNGQVDFTTNWNARAQLMNLQ
SKGRVGVVLPKEGTAFQINTINVVAGSKNAAQARAFMAYALGTEAQKAFTERVFYGPTNT
KAEISPEALNRTALAPQYRERIVNIDWAEMQKLRDSWNQRWRREVITAAR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgacaagatggatcggggcgatgcttggcgtcgccagcctggccgcggcggcggtgccg
gccgccgcccagggcaatggccagatcaccgtgatggcttacggtgacgccgtcttcagg
gacaactacatcgcgactgtcgtggagccgttccaaaaggccagcgggacacaggtacag
tatttcgccaatcccggcagtgcccagatgctcggtaccctgcgcgcccagaagggcgac
ccgcaggtcgatgtggtgatcatggataccaccaccgccgccctggcctgtgccgagggg
ctggtggagaaggtggcgccggcgcagatgccggtgctgaacgacatcgcccagcaggcg
cgcgacgccgggggcgaatgcgggcccggcgtgaccttcgacaatctggtcatgatctac
aacaccgagaacgtgaagaccacgccgacgggcttcgccgacatggcggacccccagtgg
cgcgggcgcgtcggcctcggcgggccgcctaacatccaggggctggcgctgaccgccatc
ctggccaacgccaatggcggcaagtggaacgacatctccaaggccctgccggcgctgaag
gccatcgcggccaatacccagaccttcgacccgaagccggatgccgtgaccatcgtcatg
aacgggcaggtggacttcaccaccaactggaatgcccgcgcccagctgatgaacctgcag
tccaagggacgcgtcggcgtggtgctgccgaaggaaggcacggccttccagatcaacacc
atcaatgtcgtcgccggcagcaagaacgcggcccaggcgcgcgccttcatggcttatgcc
cttggcacggaagcccagaaggccttcaccgagcgcgtcttctacggccccaccaacacc
aaggcggagatttcgcccgaggcgctgaaccgcaccgccctggcgccccagtaccgcgag
cggatcgtcaatatcgactgggcggagatgcagaagctgcgcgacagctggaaccagcgc
tggcggcgcgaggtcatcacggcggcgcgctga
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