Roseomonas marmotae: IAI58_22410
Help
Entry
IAI58_22410 CDS
T08030
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rmt
Roseomonas marmotae
Pathway
rmt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rmt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAI58_22410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmt02000
]
IAI58_22410
Transporters [BR:
rmt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IAI58_22410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QTI82111
LinkDB
All DBs
Position
p1318-6:complement(33056..34114)
Genome browser
AA seq
352 aa
AA seq
DB search
MSVPIGRRAILALPATLAMPHLATAQAAGRVIMASWGGRGAQTYRDVYGAPFTRETGIPV
TVAEVSDPAAAVAAAQGRPQHNVIVAASYQAANLANRGLIQELTPDDIPNVRHIPEEYWV
RDRQGKLIGMPTSFLYYGIAYNKELARASDLQSWHALKDRKWRGQLSITRPVFLGPYDLT
LFAKLNGSDENDIRPGVPMLEAIARNAGAVYTSMASLQTQLSRGEVAAAPFYSSQVQLLR
RAGERQVDIILPEEGGLNLSYVFAIPKNAPDQEAARRFLNRATDHQAAIGVFREAGSLPL
NPEVVIPAELEQELGLTMAEVRRRNYAPNWYTIAANLDERVRLAEQIVDRAR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcccgatcggacgccgcgccattctcgccttgccggccaccctggccatgccg
catctcgcgacggcgcaggccgccgggagggtcatcatggcctcctggggtggccgcggc
gcacagacataccgcgacgtctatggtgcgcctttcacccgggagactggcattcccgtg
acggtggccgaagtttccgatcctgcggccgctgtcgccgcggcgcagggccggccccag
cacaacgtcatcgtcgcggcgtcctaccaggctgccaacctggcgaaccgcggtctcatc
caggaattgacgccggacgacatcccgaatgtccgccacattcccgaggagtattgggtg
cgagaccggcagggcaagctgatcgggatgccaacgagcttcctctactacggcattgcc
tacaacaaggagctggcacgcgcctccgacttgcagtcctggcacgcgctcaaggaccgc
aagtggcgtgggcagctttccatcacccgcccggtcttcctgggcccttatgacctgacg
ctcttcgctaagctgaacggcagcgacgagaacgacatccgtccaggcgtgccgatgctg
gaggcaatcgcgcgcaatgccggcgcggtctacacctcgatggcgtcgctgcagacccag
ctctcgcgcggcgaggtggcggcggcaccgttctattcctcgcaggtccagctcctgagg
cgtgcgggtgagcgccaggtcgatatcatcctgccggaggaaggcgggctgaacctttct
tacgtgttcgccattccgaagaacgctcccgaccaggaagcagcgcgacggttcctcaac
cgcgctacggatcatcaggccgccatcggtgttttccgggaagccggttcgctgccgctg
aatccggaagtcgtcatcccagccgagctggagcaggagcttggcctgaccatggcggaa
gtcaggcggcgaaactatgcgccgaactggtacacgatcgccgccaatctcgacgaacgt
gtccgcctcgccgagcagatcgtagaccgggctcgctga
DBGET
integrated database retrieval system
