Rothia mucilaginosa: RMDY18_02460
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Entry
RMDY18_02460 CDS
T01144
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rmu
Rothia mucilaginosa
Pathway
rmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RMDY18_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmu03019
]
RMDY18_02460
03110 Chaperones and folding catalysts [BR:
rmu03110
]
RMDY18_02460
03029 Mitochondrial biogenesis [BR:
rmu03029
]
RMDY18_02460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmu04147
]
RMDY18_02460
Enzymes [BR:
rmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RMDY18_02460
Messenger RNA biogenesis [BR:
rmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RMDY18_02460
Chaperones and folding catalysts [BR:
rmu03110
]
Heat shock proteins
HSP60 / Chaperonin
RMDY18_02460
Mitochondrial biogenesis [BR:
rmu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RMDY18_02460
Exosome [BR:
rmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RMDY18_02460
Exosomal proteins of other body fluids (saliva and urine)
RMDY18_02460
Exosomal proteins of breast cancer cells
RMDY18_02460
Exosomal proteins of colorectal cancer cells
RMDY18_02460
Exosomal proteins of bladder cancer cells
RMDY18_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
BAI64078
UniProt:
D2NR02
LinkDB
All DBs
Position
257061..258809
Genome browser
AA seq
582 aa
AA seq
DB search
MLYALLCPRLRNGGVVEGQPPDFRCTAPARVKEEIRSSRRTLMAKLIAFDEEARRGLERG
LNTLADAVKVTLGPRGRNVVLEKAWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAK
KTDDIAGDGTTTATVLAQALVREGLRNVAAGADPLSLKRGIEKAVEAVTEALLSSAKEVE
TEEEIAATASISAGDAEIGKLIAEAMEKVGKEGVITVEDSNTFGLHLELTEGMRFDKGFL
SGYFVTDPERQEAVLEDPYILVVNQKISNVKDLVPVLEKVMQSGKPLLIVAEDVEGEALA
LLVLNKMRGSIKSVAVKAPGFGDRRKAQMADIAILTGGQVITEEVGLSLDAATLDMLGSA
RKVVVTKDETTIIEGAGDAAAIEGRVVQIRAEIANSDSDYDREKLQERLAKLAGGVAVLK
AGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQAGVKVFDKLELTGDEATGA
NIVRVAIDAPLKQIAANAGLEPGVVVDRVRSLPAGTGLNAATGEYEDLMAAGIADPVKVT
RSALQNAASIAGLFLTTEAVVANKPEPAGAAAPGADAMGSMM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgctttatgccctactctgcccgcgcctccgtaacggaggtgttgtggaggggcagcca
cccgattttagatgtaccgcacccgcaagggtgaaggaagaaatccgatcgtccaggagg
acacttatggcaaagctcattgcttttgacgaagaggcacgccgcggccttgagcgcggt
ttgaacaccctcgccgatgcagtgaaggtgaccctcggcccccgcggccgcaacgttgtg
ctggagaaggcgtggggcgcccccaccatcaccaacgacggtgtctcgatcgcgaaggaa
atcgagctggaggatccgtacgagaagattggtgcggagctcgtcaaggaagttgccaag
aagactgacgacattgccggtgacggtaccaccaccgctaccgttctggctcaggcgctg
gtccgcgagggcctgcgtaacgtggctgctggcgctgacccgctgagcctcaagcgcggt
atcgagaaggctgttgaggctgtgaccgaggctctgctctcctccgcgaaggaagttgag
accgaggaagagatcgccgcaaccgcttcgatttccgctggcgacgcagagattggcaag
ctcattgctgaggctatggagaaggtcggcaaggaaggcgtcatcaccgttgaggactcc
aacactttcggcctgcacctggagctgaccgagggtatgcgcttcgacaagggcttcctg
tccggttactttgtgaccgacccggagcgtcaggaagcagtcctggaggacccctacatc
ctggttgtgaaccagaagatttcgaacgttaaggacctcgtccccgtcctggagaaggtc
atgcagtccggcaagccgctgctgattgttgctgaggacgttgagggtgaggctctggct
ctgctggtgctgaacaagatgcgcggctccatcaagtctgttgctgtgaaggctccaggc
ttcggtgaccgccgtaaggctcagatggctgatatcgctatcttgaccggtggccaggtc
attaccgaagaggttggcctgtccctggacgcagcaaccctggatatgctcggttccgct
cgcaaggtcgttgtgaccaaggacgagaccaccatcattgagggtgcaggcgacgcagca
gctatcgagggtcgcgttgttcagattcgcgcagagatcgctaactctgactccgactac
gaccgtgagaagctgcaggagcgcctggctaagctcgccggtggtgttgctgtgctgaag
gctggtgccgcaaccgaggttgagctgaaggaacgcaagcaccgcattgaggatgctgtg
cgtaacgctaaggctgctgttgaggagggtatcgtccccggtggtggcgttgctctgatt
caggctggcgtgaaggtcttcgacaagctggagctgaccggtgacgaggctaccggcgcg
aacattgtgcgcgtggctattgatgcaccgctgaagcagattgctgctaacgctggcctg
gagccgggcgttgtggttgaccgcgttcgttccctgcctgctggtaccggcctgaacgct
gcgaccggcgagtacgaggacctgatggctgctggtattgctgacccggtgaaggtgacc
cgttcggctctgcagaacgctgcgtctattgctggtctgttcctgaccactgaggctgtt
gttgcgaacaagccggagcccgctggtgcggctgctcccggtgcggacgcaatgggcagc
atgatgtaa
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