Rothia mucilaginosa: RMDY18_05360
Help
Entry
RMDY18_05360 CDS
T01144
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rmu
Rothia mucilaginosa
Pathway
rmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RMDY18_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmu03019
]
RMDY18_05360
03110 Chaperones and folding catalysts [BR:
rmu03110
]
RMDY18_05360
03029 Mitochondrial biogenesis [BR:
rmu03029
]
RMDY18_05360
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmu04147
]
RMDY18_05360
Enzymes [BR:
rmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RMDY18_05360
Messenger RNA biogenesis [BR:
rmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RMDY18_05360
Chaperones and folding catalysts [BR:
rmu03110
]
Heat shock proteins
HSP60 / Chaperonin
RMDY18_05360
Mitochondrial biogenesis [BR:
rmu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RMDY18_05360
Exosome [BR:
rmu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RMDY18_05360
Exosomal proteins of other body fluids (saliva and urine)
RMDY18_05360
Exosomal proteins of breast cancer cells
RMDY18_05360
Exosomal proteins of colorectal cancer cells
RMDY18_05360
Exosomal proteins of bladder cancer cells
RMDY18_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAI64368
UniProt:
D2NRU2
LinkDB
All DBs
Position
552831..554417
Genome browser
AA seq
528 aa
AA seq
DB search
MAKQLEFNDAARKSLQAGVDKLANAVKVTLGPRGRNVVLDKQWGAPVITNDGVSIAREIE
LDDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQALVNEGLRNVTSGAAPADVKRGIE
AAVEAVSARLLENARPVQGPEVAHVAAISAQSEQIGELLARAFEKVGQDGVITIEDGSST
EIELEITEGMQFDKGYLSPSFVTDAERGEAVLENSLVLLYQGKISTIAEIMPVLEKIVQA
KKPLTIIAEDVDGEALSALVVNKLRGTINVVALKAPGFGDRRKAIMQDLAILTGGTVVTG
ELGIDLPQVTLEHLGSARRVTVTKSHTTIVDGGGDPEAIEDRVQQLRREIERVDSEWDRE
KLKERLAKLAGGVGVIKVGAATEVEAKERKHRIEDAVSSTRAALEEGIVSGGGSALVHAL
KALDGMDLGNHDANVGVQIVRRALVQPLRWIAENAGEDGYVIVSKVSELPVGHGFNAKTG
EYVDLIEAGVIDPVKVTRSALQNASSIAALVLTTETLVVEKPEETEED
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcagcttgaattcaacgatgccgcccgcaagtccctgcaggctggcgtcgat
aagctggcaaacgcggtcaaggtaaccctcggcccgcgcgggcgcaacgttgtgctcgac
aagcagtggggtgcacccgtcatcaccaacgacggcgtgtccattgcccgcgagattgaa
ctggacgacccgtacgagaacctgggtgcccagctggcgaaggaagtcgccaccaagacc
aatgacgttgccggtgacggcaccaccaccgcaaccgtgctcgcgcaggcgctggtgaac
gagggcctgcgcaacgtgaccagcggtgcggctcccgccgacgtcaagcgcggcatcgag
gcggccgtggaggctgtctccgcacgcctgctcgagaacgcacgtcccgtgcagggcccc
gaggtggcgcacgtcgccgctatctccgcgcagtccgagcagattggtgagctgctggct
cgcgccttcgagaaggtcggccaggacggcgtcatcaccatcgaggacggttcctccact
gagattgagctggagatcaccgagggtatgcagttcgacaagggctacctctcgccctcc
ttcgtcaccgacgctgagcgcggcgaagcagtgctggagaacagcctcgtgctgctctac
cagggcaagatttccaccatcgcagaaatcatgcccgtgctcgagaagatcgttcaggcg
aagaagccgctgaccatcatcgcagaagacgttgacggtgaggcgctctccgccctggtc
gtgaacaagctgcgcggcaccatcaacgtggttgctctgaaggcccccggtttcggcgac
cgccgcaaggccatcatgcaggacctcgcgatcctgaccggtggtaccgtcgtgaccggc
gagctcggcattgacctgccgcaggtcaccctggagcacctgggttcggcacgccgcgtg
accgtgaccaagtcccacaccaccatcgtggacggcggcggagaccccgaggccatcgag
gaccgcgtgcagcagctgcgccgcgaaattgagcgcgtggattccgaatgggaccgcgag
aagctcaaggagcgcctggctaagctcgccggcggcgtgggcgtcatcaaggtcggtgcc
gcaaccgaggttgaggcgaaggaacgcaagcaccgcatcgaggacgctgtgtcctccacc
cgtgccgctctggaagagggcatcgtctccggtggcggttccgcactggttcacgcgctg
aaggcactggacggcatggacctgggcaaccacgacgcaaacgtgggtgtacagatcgtt
cgccgagccctggttcagccgctgcgctggatcgctgagaacgctggcgaagacggctac
gtcatcgtctccaaggtctccgagctgcccgtgggtcacggcttcaacgccaagaccggc
gagtacgtggacctcatcgaagccggtgtgattgacccggtgaaggtgacccgttcggcc
ctgcagaacgcctcctccatcgcggctctggtgctgaccaccgagaccctggtggttgag
aagcccgaagaaactgaagaagactaa
DBGET
integrated database retrieval system
