Rothia mucilaginosa: RMDY18_06430
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Entry
RMDY18_06430 CDS
T01144
Name
(GenBank) superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rmu
Rothia mucilaginosa
Pathway
rmu03420
Nucleotide excision repair
rmu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RMDY18_06430
03430 Mismatch repair
RMDY18_06430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmu03400
]
RMDY18_06430
Enzymes [BR:
rmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMDY18_06430
DNA repair and recombination proteins [BR:
rmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RMDY18_06430
MMR (mismatch excision repair)
Other MMR factors
RMDY18_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DUF7260
Motif
Other DBs
NCBI-ProteinID:
BAI64475
UniProt:
D2NS49
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All DBs
Position
673839..675758
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AA seq
639 aa
AA seq
DB search
MTATPQQPQHMISADDILAGLDPDQRAVATELNGPMRVLAGAGTGKTRAITHRIAYGIAI
GRYQGPRVLALTFTLRAAEEMRTRLHQLGAHGVQARTFHSAALRQLVYFWPQVVGGTFPS
IVQNKASLITEAANRLRISTDRSLLRDLASLIEWAKVQLLTPDTIMQRLSEKQLPSAITP
QNMQRIFQAYEDLKDERNLIDFEDVLLLTIAMLEEDEKLAATVRNQYRHFVVDEYQDVSP
LQQRLLDVWLGGRDDICVVGDASQTIYSFTGATSRYLLDFARRYRGAHTVKLTRDYRSHS
QVVELANRLLAARRPHPDSSPHSWAPPLELMSQRGPGVDVEWFGYADDEQEAAGIAEDIR
DLIEKDGVPPSEIAVLFRTNAQSAAIESALAAAHIPYQLRGAERFFERPEVKQAMLALRG
SAKSTDGTEDVTRYTRDVLGGLGYKEEGPLSGGATRQKWESLAALVHMVDMMAQHRQEQL
QEHRANPRPGVPEPLPLTMHEVVATLNHRSEFNDAPQVNGVTLASLHAAKGLEWDAVFLC
GLNEGLMPITFATTPDEVDEERRLLYVGITRARKYLWLTWTMTRTVGGRGQRKRSRFLDD
IDPAKRRRRAESAGSSYSQPRATQPRRSSKGRGDYGSAF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacacctcagcagcctcagcatatgatctccgcagacgatattcttgccggg
cttgacccggatcagcgtgcggtcgccaccgagctgaacggccccatgcgtgtgctggcg
ggtgcgggtaccggtaagacccgcgcgattacgcaccgcatcgcctacggtattgcgatt
gggcgctaccagggcccgcgcgtgctcgccctgacctttaccctgcgtgctgcggaggag
atgcgcacccgcctgcaccagctgggtgcgcacggcgtgcaggcgcgtactttccactcg
gcggcgctgcgtcagctggtgtatttctggccgcaggtggtgggcggtacgttcccgtcc
attgtgcagaataaagcctcgctcattacggaggcggcgaaccgtctgcgcatcagcacg
gaccgttccctgctgcgtgatttggcatcgctgattgagtgggcgaaagttcagctgctc
accccggacaccatcatgcagcgcctgagcgagaagcagctgccctcggcgattaccccg
cagaatatgcagcgtattttccaggcgtatgaggatttgaaggatgagcgtaacctcatc
gactttgaggacgtactgctgctgaccatcgccatgctggaggaggacgagaagctcgcc
gcgaccgtccgcaaccagtaccgtcactttgtggtggatgagtaccaggacgtctccccg
ctacagcagcgtctgctggatgtgtggctgggtggccgcgacgatatttgcgtggtgggc
gacgcctcccagacgatttactcttttaccggtgcgaccagccgttacctgctggatttt
gcgcgccggtaccgtggcgcgcacacggtgaagctgacccgcgactaccgctcgcattcg
caggtggtggagttggcgaaccgtctgttggcggcgcgtcgtccgcatccggattcgagc
ccgcattcgtgggcgccgccgctggagctgatgtctcagcgcggccccggcgtggatgtg
gagtggttcggctatgccgacgatgagcaggaggcggcaggcattgccgaggatatccgc
gacctgattgagaaggacggcgtgccgccttcggagattgcggtgctgttccgcacgaac
gcgcagtcggcggcgattgagtctgcgctggctgccgcccacattccgtaccagctgcgc
ggcgcggagcgtttctttgagcgccccgaggtcaagcaggcgatgctcgctctgcgcggt
tcggcgaagtccacggatggtaccgaggacgtcacccgctacacccgcgatgtgctcggc
ggcctcggctataaggaggaaggccccctttcgggaggcgccacccgccagaagtgggag
tccctcgccgccctggtgcatatggtggatatgatggcgcagcaccgccaagagcagctt
caggagcaccgcgcgaatcctcgcccgggcgtgcccgagccgctccctttgaccatgcac
gaggtggtggcgaccctgaaccaccgcagcgaattcaacgacgcaccgcaggtcaacggc
gtaaccctcgcctccctgcacgcggctaagggcctggagtgggatgccgtgttcctgtgc
ggcctgaacgagggcctcatgcccatcacttttgcgaccaccccggacgaggtggatgag
gagcgccgcctgctgtacgtgggcattacgcgcgcccgcaagtacctgtggctaacctgg
acgatgacccgcaccgtgggcggtcgcggtcagcgtaagcgttcgcgtttcctggacgat
attgatccggcgaagcgccgccgcagggctgagagcgccggctcgtcgtatagccagcct
cgtgccacgcagccccgccgttcgtcaaagggaagaggagattatggctcagcgttttaa
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