Rothia mucilaginosa: RMDY18_07460
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Entry
RMDY18_07460 CDS
T01144
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rmu
Rothia mucilaginosa
Pathway
rmu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RMDY18_07460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmu02000
]
RMDY18_07460
Transporters [BR:
rmu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RMDY18_07460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NolX
Motif
Other DBs
NCBI-ProteinID:
BAI64578
UniProt:
D2NSF2
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All DBs
Position
complement(797796..799913)
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AA seq
705 aa
AA seq
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MQHQPYASSAVGSSDALLRATAGSSGLSRRAVLRFGALFSAGLALSACSGQSSAGSSASA
SASSADARRVFRFAQGAAPLGLDPALFPVASTYQVTAQILQTLLVANHYTGDPEVQDSLC
SEWTVSDDRLVHTFVLREAHFSNGSALTADAVVQNFQRWQALATGEGTAALAVPAQPLFA
WGFGVPKPGSSDPSAVEPAPVQASPSGAATPGATASVSASASASAHAATQPDDKKTSKKA
DAQSSAVQSFLPLVSSVVAKGNSVVVTLSRPSLAFPRILTQQAFGIIDPSLFGSDQKLTG
NPVGTGAFLVDSFKDGTVRLLKNTHFDGQAPELDEIQISTLTSSDKRYFALMEGHIDACD
QVNSSDLGQLARDGYQTPGRDPFSLVYLSLNTAHPVLKNISVRRAISHAVDRGALRQYYP
QGTSDAQTLISPSFRIKADDAKDYTDRNQDMARSLLATAGYDNQVIECYYPADVSLPWMD
TPQKVYSEMVASLIEVGLNIKPVPLPWAEYLPKSREVSSERGITLAGFYGMYRDPYAFFG
PVLAPLIAEHQVRSLIANAPSDMTTGLTKKSSDVPSSGGSDSNVRISATPSPQPSYSPDS
SSPEEEASASASPSPSASPSPQPTAVAVAPSPRFTEILEAIRTADSADSVDSQRELYAKV
VSQLGQFMPAVPLLNVTSKVAVSREVQGYQTEQNAIELFGKLRKS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcatcagccttatgcatcgtcagctgttggcagttctgatgcgctgctgcgagcc
actgccggctcgagtggcttgagtcgacgtgccgttttgcgttttggcgcgctttttagt
gctggtttggcgctttctgcgtgttctggtcagtcttctgctggttcttcggcgagtgcg
agcgcatcgtctgctgatgcgcgtcgtgtgtttcgttttgcgcagggtgcggcgccgttg
ggtttggatccggcgttgtttcctgtggcgagtacgtatcaggtgacggcgcagattttg
cagacgttgttggtggcgaatcattacacgggtgatcctgaagttcaggattcgttgtgt
agtgagtggacggtttctgatgaccgtttggtgcatacgtttgtgttgcgtgaggctcat
tttagtaacggttctgcgttgactgcggatgctgtggtgcagaatttccagaggtggcag
gcgttggctacgggtgagggtactgctgctttggcggtgcctgctcagcctttgtttgcg
tggggttttggtgtgccgaagccgggttcttctgatccgtcggcggtggagcctgcgccg
gttcaggcgtcgccgtcgggtgcggcgaccccgggggctaccgcgagtgtttctgcaagt
gcttctgcgagcgctcatgctgctactcagccggatgataagaagaccagcaagaaggcg
gatgctcagtcgtctgcggtgcagtcgttcttgccgctggtttcgtcggtggtggcgaag
ggcaactctgtggtggtgacgctgtcgcgtccttcgttggcgttcccgcgtatcttgacg
cagcaggcgttcggcattattgacccgtcgctgtttggttctgatcagaagttgacgggt
aacccggtgggtacgggtgcgttccttgtggattctttcaaggacggcacggtgcgtctg
ctgaagaatactcattttgacggtcaggcacctgagctggatgagattcagatttcgacc
ctcacgtcgtcggataagcgttattttgcgctgatggagggtcacattgatgcgtgtgat
caggtgaattcttctgatctgggtcagttggcgcgtgatggttatcagacgccgggccgt
gacccgttctcgctggtgtatttgagcctgaatacggcgcatccggtgttgaagaatatt
tcggtgcgtcgcgctatttcgcatgcggtggatcgtggcgcgctacgtcagtattacccg
cagggcacctcggatgcgcagacgctgatttcgccgtcgttccgcattaaagctgatgac
gcgaaggattacacggaccgcaatcaggatatggcgcgctcgctgttggcgactgctggg
tacgacaatcaggtgattgagtgctactaccctgctgacgtttctctgccgtggatggat
actcctcagaaggtgtattcggagatggtggcttcgctgattgaggtgggtttgaatatt
aagccggtgcctctgccgtgggctgagtatctgccgaagagccgcgaggtttcttctgaa
cgcggtattaccttggcgggtttctacggcatgtaccgtgacccgtatgcgttctttggc
ccggtgttggcgccgctgattgctgagcatcaggtgcgttcgttgattgctaatgcgcca
tcggatatgacgactggtttgacgaagaagagttctgatgtgccgtcgtcgggtggttcg
gattcgaatgtgcggatttctgcgactccgagcccgcagccgagttattcgccggattcg
tcgtctccggaggaggaagcttcggcttctgcttcgccgagcccgtcggcgtcgccttcg
ccgcagcctactgctgtggcggttgcgccgtcgcctcgttttacggagattttggaggcg
attcgtaccgcggactctgccgattcggtggattcgcagcgcgagctgtatgcgaaggtt
gtatctcagttgggtcagttcatgccggcggttccgttgctgaatgtgacgtctaaggtg
gctgtgagccgtgaggttcagggctatcagacggagcagaatgcgattgagctgttcggt
aagctgcgtaagtcttag
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