KEGG   Rothia mucilaginosa: RMDY18_08380
Entry
RMDY18_08380      CDS       T01144                                 
Name
(GenBank) signal recognition particle GTPase
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rmu  Rothia mucilaginosa
Pathway
rmu02024  Quorum sensing
rmu03060  Protein export
rmu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RMDY18_08380
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RMDY18_08380
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RMDY18_08380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rmu02044]
    RMDY18_08380
Enzymes [BR:rmu01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RMDY18_08380
Secretion system [BR:rmu02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RMDY18_08380
  Eukaryotic Sec-SRP protein
   RMDY18_08380
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 nSTAND3 CbiA cobW Zeta_toxin APS_kinase AAA_18 NPHP3_N AAA_16 Thymidylate_kin AAA_5 MobB 6PF2K TsaE NACHT Syndetin_C AAA_25 ArsA_ATPase
Other DBs
NCBI-ProteinID: BAI64670
UniProt: D2NSP4
LinkDB
Position
911947..913524
AA seq 525 aa
MFNSLSDRLTATFKNLRGKGRLSEADIDATVREIRRALLDADVAVPVVREFTAHVKERAL
GAEVSEALNPSQQIVKIVNEELVSILGGSTRRINMAKSGPTIIMLAGLQGAGKTTLAGKL
AHWLKGQGHTPMLIASDLQRPNAVTQLKVVGERAGVPVYAPHPGVTSEFDVPTGDPVQVA
RDGVAEARAKLHDVVIVDTAGRLGVDAELMQQARNIRDAIEPHEVLFVIDAMIGQDAVNT
ANAFNEGVDFTGVVLSKLDGDARGGAALSVASVTGKPIMFASTGENVTDFEQFHPDRMAS
RILDMGDILTLIEQAEAQWDKAEADRMAKKFIDQEDFTFEDFLAQMQQIRKLGSMKKLLM
MMPGAAQMRQQLEAFDEREIDRVEAIVRSMTPHERVAPRIINGSRRARIAKGAGVTVSEV
NQLMERFAQAQKMMKKLASGKMPGMPGGMQMPGMAAAAGGARKNAKNNKKKKARSGNPQK
RAAQEAAAAKAQQARAGAAFGQQAQNQEMDLSSMNLPKGFEKFLQ
NT seq 1578 nt   +upstreamnt  +downstreamnt
gtgttcaattctctctccgaccgcttgacggcaacttttaagaacctgcgcggcaagggc
cgcctctccgaggcagacattgatgcaaccgtccgcgaaatccgccgcgccctgctcgac
gctgacgtcgccgtccccgtggtccgcgaatttaccgcccacgtgaaggaacgcgctctt
ggtgcggaagtttccgaggcgctgaacccctcccagcagatcgtcaagatcgtgaacgag
gagctggtgagcatcctcggcggttcgacccgccgcatcaacatggcgaagagcggcccg
accatcatcatgctggcgggtctgcagggtgccggtaagaccaccctggcgggcaagctg
gctcactggttgaagggccaaggtcacaccccgatgctgattgcatccgacctgcagcgc
cctaacgcggtgacccagctgaaggttgttggtgagcgtgcgggcgtgcccgtgtacgcg
ccgcaccccggtgtgaccagcgagtttgacgtacccaccggcgatcccgtgcaggtggca
cgtgacggtgtggctgaggctcgcgctaagctgcacgacgtggtgattgtcgataccgcg
ggtcgtctgggtgttgacgctgagctcatgcagcaggcacgtaacattcgtgacgctatt
gagccgcacgaagttctgttcgttatcgatgcgatgatcggtcaggacgctgtgaacacc
gctaacgcattcaacgagggcgtggacttcaccggtgtggtcctgtctaagcttgatggt
gacgcccgcggtggtgcagcgctgtcggtggcttcggtgaccggcaagccgattatgttc
gcgtccactggtgagaacgtcactgactttgagcagttccacccggaccgtatggcaagc
cgcatcctggatatgggtgacatcctgactctgattgagcaggctgaagctcagtgggat
aaggctgaagccgaccgcatggcgaagaagttcatcgatcaggaagacttcacttttgag
gacttcctggctcagatgcagcagattcgtaagcttggttccatgaagaagctgctcatg
atgatgcccggtgcggctcagatgcgtcagcagcttgaggcttttgacgagcgcgagatt
gaccgcgtggaggcgattgttcgctccatgaccccgcacgagcgtgtggctccgcgcatc
attaacggttctcgccgtgcccgtatcgctaagggtgcgggtgtgaccgtgtctgaggtg
aaccagctgatggagcgtttcgctcaggctcagaagatgatgaagaagctcgcttcgggc
aagatgcccggcatgcccggtggtatgcagatgcccggtatggcggctgcggccggtggc
gctcgtaagaacgcgaagaacaacaagaagaagaaggctcgctccggcaacccgcagaag
cgtgcggcgcaggaagcggcagcagctaaggcgcagcaggctcgcgccggtgctgcattc
ggtcagcaggctcagaaccaggagatggatctgtccagcatgaacctgccgaagggcttc
gagaagttcctgcagtaa

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