KEGG   Rothia mucilaginosa: RMDY18_09570
Entry
RMDY18_09570      CDS       T01144                                 
Name
(GenBank) type I site-specific restriction-modification system, R (restriction) subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rmu  Rothia mucilaginosa
Brite
KEGG Orthology (KO) [BR:rmu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rmu02048]
    RMDY18_09570
Enzymes [BR:rmu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RMDY18_09570
Prokaryotic defense system [BR:rmu02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RMDY18_09570
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like EcoR124_C HSDR_N ResIII DEAD HSDR_N_2 TraY
Other DBs
NCBI-ProteinID: BAI64789
UniProt: D2NT13
LinkDB
Position
1048825..1052160
AA seq 1111 aa
MQRSTPVETVPDYSHPTEGFTERILSSDTFTVLGDRTEAPHYDEWAKANEKRKGLQTEAQ
LEAELIDTLRDQGYEYLSNLTDETALIRNLREQLERFNTRPEEGAYGPNSGFHFTDEEFD
RLLTEHLARSNDGILEKAKLIQEERFIDFRLDDGTLRNIMLIDAVYPARNRMQVVNQYRV
PAANGKTRNRYDVTILVNGLPLVHIELKKRSVGIQEAFQQIERYQGAGFQEDTHRFFEYA
QIFIISNGVKTKYYSNTVRHKHIEDLQEVRRKNPSGGSAGKSFEFTSYWADAKNNRISDL
MLFARTFLAKNALANILTRYCILTVDQDLLVMRPYQIAATERIINCVKTADKSKNSDKTF
GTKKAGGYIWHTTGSGKTLTSFKTARRLAETGLVEKVIFVVDRKDLDYQTMLEYNNFQAD
SVSSSSSTRQLSDRLADRGTSIVVTTIHKLSNLTNAEPKHPVYGQRVAIIFDECHRSQFG
QMNANIKKYFKNYCMFGFTGTPIFDGNSAGGPGTTTGEVFGECLHTYTVVDAIRDGNVLP
FHLEYTNTSPTFACLEESVYAEEIAAERAATPDAKELEKLAKAKAVLESPERIEAIATYI
LDNYDRKTNQKERDYDLKKSRTINKVTEHYVERVRGFNSILATSSIDAACTYYDALNTLQ
EERIAEGVLDPAKKLKVAIIYSQGNGGQLIDTFGEGENYEFPTGDTGSRMDGFLEDYNTM
FGTNFSTDGDSFDNYYKDVSRRMKVRELDLLIVVNMFLTGFDSKTVNTLWVDKNLKMHGL
VQAYSRTNRIFNSVKRSGNVVCFRDLEQATKDAFTLFGDTENSDGQSALDIAFTRPYKEA
FEEYREAVTTLREEFGMDEGGSITVDTPEEKARYIKLMNDVLELRQELRVHDEFIRDGGD
ELISDYDMQGYTGVYNDIYDEIREMRKAREEGTDEGEDRTDDVDLFANVHFLTELVKQQE
IGVDYILALIEAAHESNSDATEDIERAVNSSSELRASADIITDFSKEYRNTPNPGDVYEH
FNRYVTERRSREEDEIVRDENLDPEETQRVVNRALKEGRRTISGKFTSLIKVKMPIFGGD
PSSEDAVSKTKRVKQRLEKHLDRFMSLLGGR
NT seq 3336 nt   +upstreamnt  +downstreamnt
atgcaaaggagcacccccgtggaaaccgtacctgattactcccaccctaccgagggattc
actgaacgcatcctcagctcggataccttcaccgtcttgggtgaccgtaccgaagccccc
cactacgatgagtgggcgaaggctaacgaaaagcgtaaaggcctgcagactgaagcgcag
cttgaagctgaacttatcgatacccttagggatcagggctatgagtatctgtcgaacctg
actgatgagactgctcttatccgtaatctgcgtgaacagcttgaacgtttcaatacccgc
cctgaagaaggcgcctacgggcccaacagtggtttccactttactgatgaagagtttgac
cgtctgctcaccgagcaccttgcccgctctaacgatggcatcttggagaaggccaagctc
atccaggaagaacgcttcatcgacttccgccttgatgacggcactttgcgcaacatcatg
ctcatcgacgccgtctaccccgcacgcaaccgcatgcaggttgttaaccagtaccgtgta
cctgctgccaacggtaagacgcgcaaccgttatgacgtgaccatcctggtcaacggcctg
cccctggttcatatcgagctgaagaagcgtagcgttggtattcaggaggccttccagcag
attgaacgctaccagggcgccggattccaggaagacacccaccgtttcttcgaatacgcc
caaatctttatcatcagcaacggtgtaaaaaccaagtactactccaacaccgtgcgccat
aagcacattgaagacctacaggaggtccgccgtaagaatccctcgggcggttcggcaggc
aagagcttcgaattcaccagctactgggctgacgccaagaacaaccgcatcagcgacctg
atgctttttgctcgcaccttcctggctaagaacgctctggcgaacatcctgacccgctac
tgcatccttacggtagatcaggatctgctggtgatgcgcccgtaccagattgcggcgact
gaacgcattattaattgcgttaaaaccgctgataagtccaagaacagtgataagaccttc
ggcactaaaaaggccggtggctacatttggcataccaccggtagcggtaagaccctcacc
agtttcaagaccgcgcgccgcctggcagaaaccgggcttgtcgagaaggtcatctttgtc
gtggaccgtaaggacctcgactaccagaccatgctcgagtacaacaacttccaggcggac
tctgttagctccagtagcagcactcgtcagctgagcgaccgcctggcagaccgaggaacc
agcattgtggtcaccaccattcataagctgtctaacctcactaacgccgaacccaagcac
cccgtctacggccagcgtgtagccatcatttttgatgaatgccaccgctcccagttcggc
cagatgaacgccaacatcaagaagtatttcaagaactactgcatgttcgggttcactggc
acccccatctttgatggaaactccgcaggcggccccggcaccaccaccggtgaggtcttt
ggtgaatgcctgcacacctacaccgtcgtggatgctatccgtgatgggaacgtgttgcct
ttccacctggaatacaccaacaccagccctacctttgcttgccttgaagagagtgtctat
gccgaggaaattgctgctgaacgcgccgcaacccccgacgcgaaggaacttgaaaagctt
gccaaggccaaggcagtacttgaaagccctgaacgtatcgaggctatcgccacctacatt
ctggataactacgaccgtaagactaaccagaaagaacgtgactacgatctgaagaagagc
cgcaccatcaacaaggtgaccgaacactacgtagagcgcgtgcgcggcttcaactcgatc
ctggcaacctcctccatcgacgctgcctgtacctactacgacgcccttaacaccctgcag
gaagaacgcattgctgagggtgtgcttgaccctgccaagaagctgaaggttgccatcatc
tactcgcagggtaacggcggacagctgattgatacttttggtgagggagaaaactacgaa
ttccccaccggggacaccggcagccgcatggacggcttcctcgaagactacaacactatg
ttcggcacgaacttcagcaccgacggtgactccttcgacaactactacaaggatgtctcc
cgccgcatgaaggtgcgcgaactggacctgctcattgtcgtgaacatgttcctgaccggt
tttgactccaagactgtcaacaccctctgggtggataagaacctgaagatgcacgggctg
gtgcaggcgtacagccgtaccaaccgaatctttaactcggtgaagcgctccggtaacgtg
gtgtgcttccgcgacctggaacaggcgaccaaggacgccttcaccctcttcggcgacacc
gaaaacagcgacggccagtctgcccttgatatcgcgttcacccgaccctacaaggaagct
ttcgaggagtaccgcgaagcggtcaccacgctgcgtgaagaattcggcatggatgagggc
ggctccattaccgtggacactccggaagagaaggcccgctacatcaagctcatgaacgat
gtgcttgaactgcggcaggagctgcgcgtgcatgacgagttcatccgtgacggcggcgat
gagctgatcagcgactacgacatgcagggctacaccggtgtctataacgacatttacgac
gagattcgtgagatgcgtaaggctcgggaagaaggaaccgacgagggcgaggaccggacc
gatgacgtggacctgttcgctaatgtccacttcctcactgagctggtcaagcaacaggaa
atcggtgtcgactacatcctggctctcatcgaggcagcacacgaatctaacagcgacgcc
accgaggacatcgaacgtgccgtcaacagtagtagcgaactacgcgctagcgccgacatc
atcacggatttctccaaggagtataggaacaccccgaaccccggagacgtctacgagcac
ttcaaccgctacgtgactgagcgtcgtagccgtgaagaagacgaaattgtgcgggatgaa
aacctagatcctgaggagactcagcgcgtagtcaaccgtgctctgaaggagggacgccga
acaatctctggcaagttcacttccctcatcaaggtgaagatgccgatctttggtggcgat
cctagtagtgaggatgctgtgtctaagactaagcgtgtgaagcagaggctggagaagcat
ctggaccgttttatgtcgttgctgggcggccgctaa

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