Rothia mucilaginosa: RMDY18_09990
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Entry
RMDY18_09990 CDS
T01144
Name
(GenBank) DNA-directed RNA polymerase, subunit K/omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rmu
Rothia mucilaginosa
Pathway
rmu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RMDY18_09990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmu03021
]
RMDY18_09990
03400 DNA repair and recombination proteins [BR:
rmu03400
]
RMDY18_09990
Enzymes [BR:
rmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RMDY18_09990
Transcription machinery [BR:
rmu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RMDY18_09990
DNA repair and recombination proteins [BR:
rmu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RMDY18_09990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF6105
Motif
Other DBs
NCBI-ProteinID:
BAI64831
UniProt:
D2NT55
LinkDB
All DBs
Position
1095560..1096060
Genome browser
AA seq
166 aa
AA seq
DB search
MFGTYIPSSYLEFLVANEIKEHEDYNFVDGVAPEGIVSPSADALIEKAESKYGLVIFGAR
RARQINAYYANLQDNTAAHVGPLVDAESNEKSLSVAMREIIADRVVAEHRPDAKFDEDGY
PIPEDLSAVIDFSAAEFSGAIEEEYIPAGSEEVIAIEEVILDESAE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
gtgttcggtacgtacattccatcaagctatttggagtttttagtggcaaacgaaatcaag
gaacacgaggactacaacttcgttgacggtgtcgctcccgagggcatcgtgagccccagc
gctgacgcgctgattgagaaggctgagtccaagtacggcctggtgattttcggtgcccgc
cgtgcacgccagattaacgcgtactacgctaacctgcaggacaatactgctgcgcacgtt
ggcccgctggttgacgctgagtcgaacgagaagtccctgtcggtggcaatgcgtgaaatc
attgctgaccgtgttgtggcggagcaccgcccggacgcaaagttcgacgaggacggctac
ccgattcccgaggatctgtccgctgtgattgatttcagcgcggctgagttctccggcgct
atcgaggaggagtacatccccgcaggtagcgaagaggttatcgctatcgaagaggttatc
ctcgacgagtccgctgagtaa
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