Rothia mucilaginosa: RMDY18_12320
Help
Entry
RMDY18_12320 CDS
T01144
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rmu
Rothia mucilaginosa
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmu03016
]
RMDY18_12320
Enzymes [BR:
rmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RMDY18_12320
Transfer RNA biogenesis [BR:
rmu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RMDY18_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAI65064
UniProt:
D2NTT8
LinkDB
All DBs
Position
1390249..1391598
Genome browser
AA seq
449 aa
AA seq
DB search
MFARAYAYPGIWRIVWARRTRQRKRIECMSTAAEQNAAGTPQLTLNGIEVPDVVPLEAPS
SPIPTLITTESGLRRAAEQLAAASGPVAVDTERAQGIRYGSRAFLVQLKREDQLYLIDPE
AFKDLRIINDALADAEWVIHAAIQDFPSLDMLGMRPNRLFDTELGARLAGLERVNLGATV
EELLGYKLAKKHSKEDWSRRPLPESWLNYALLDVDVLIDLRDALEDLLRQQGKLQYALEE
FEYLCKTPVKDPTDQPERWRKTKGRTMLRSVKQLTALRNLWHERDSLARKKDVDAKRLLP
DSAIVEAARTMPRNVPAVMAIPGFQTRGLRREGPRWVRAIAAAARGENAVPFTLPSTAPP
PLKAWESKRPENLALFTEVRQAIDELSEELTIPAQNLITTDYVRRLCWEPPARFDEQTLR
DALAEYGARPWQTGLVAPVIAPIFARHLG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgctcgggcgtacgcctacccaggcatctggcgcatcgtatgggcgcgtcgaacc
agacagaggaaaaggattgagtgcatgagtaccgcagctgaacagaatgccgcaggcacc
cctcagctgacccttaacggtatcgaagttccggacgttgttcctctggaggccccttcc
tcaccgattccgactctcatcaccactgagagtggtctgcgtcgtgccgctgagcagttg
gcggcggcgtccggcccggtggctgttgatactgagcgtgctcagggcatccgctacggt
tcgcgtgcttttttggtgcagcttaagcgtgaagatcagttgtacctgattgaccctgag
gcgtttaaggatttgcgcattattaacgatgctttggcggatgctgagtgggttattcac
gccgcgattcaggacttcccgagcctggatatgctcggtatgcgcccgaaccgcctgttt
gatacggagcttggtgcgcgtcttgccggtctggagcgcgtgaatctgggtgcgaccgtt
gaggagctgctcggctataagctggcgaagaagcactcgaaggaagactggtcgcgccgc
cccctgccggagtcttggctgaactatgcgctgctggatgttgacgtgctcattgatttg
cgtgacgcgttggaggatttgctccgccagcagggtaagctgcagtacgctctggaggag
ttcgagtacctgtgcaagaccccggtgaaggatccgacggatcagccggagcgttggcgt
aagacgaagggccgcacgatgttgcgttcggtcaagcagctgacggcgctgcgtaacctg
tggcatgagcgtgactcgctggcgcgtaagaaggacgttgacgcgaagcgtctgctaccc
gattctgcgattgtggaggcggcacgcaccatgccgcgtaacgtgcccgcggttatggcg
atccccggttttcagacgcgcggtctgcgccgtgagggcccgcgctgggtgcgtgctatt
gccgcggcggcacgcggtgagaacgccgtaccgttcactttgccgtcgactgccccgccg
ccgttgaaggcttgggagtctaagcgccccgaaaacttggcgctgttcaccgaggttcgt
caggcaattgatgagctctctgaggagctgaccattccagcgcagaacctgatcacgacc
gattatgttcgccgcctctgctgggagccgccggcgcgttttgacgagcagaccctgcgg
gatgcactcgccgagtacggtgcgcgcccctggcagactggtctggttgcccccgtgatt
gcgccgatttttgcccgtcacctggggtag
DBGET
integrated database retrieval system
