Rothia mucilaginosa: RMDY18_12600
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Entry
RMDY18_12600 CDS
T01144
Name
(GenBank) type IIA topoisomerase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rmu
Rothia mucilaginosa
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmu03032
]
RMDY18_12600
03400 DNA repair and recombination proteins [BR:
rmu03400
]
RMDY18_12600
Enzymes [BR:
rmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RMDY18_12600
DNA replication proteins [BR:
rmu03032
]
Prokaryotic type
DNA Topoisomerases
RMDY18_12600
DNA repair and recombination proteins [BR:
rmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RMDY18_12600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BAI65092
UniProt:
D2NTW6
LinkDB
All DBs
Position
complement(1423280..1425454)
Genome browser
AA seq
724 aa
AA seq
DB search
MSRTRTPPGGTRSPPQTYSPERIPVASSNYTARHLSVLEGLEAVRKRPGMYIGSTDSRGL
MHCLWEIIDNSVDEALAGFGQSIQVILYRDGSVEVRDDGRGIPTDIEPRTGLSGVEVVFT
KLHAGGKFGGGSYNASGGLHGVGASVVNALSSRLDVQVDRGSKTYQMSFRHGIPGFFESG
RTPKPEDPFTPATEGTDALQIVGRAKRGVTGTRVRYWADPQIFTPDAKFSYEDLAARVRQ
TAFLIPGLRICIRDERRLPGTPGELEPHEEVFQYDGGISEFVEFLAHDERITDTWRFSGS
GSFTETVPVLGEDGRSQLTDVERDCEVDVALRWGIGYETTVRSFVNIIATPKGGTHTTGF
EQGLLRVMRKHLADNARKYKVGNDKIEKDDVLAGLTAVLTVRLAEPQFEGQTKEILGTPA
VRQIVSKVVGDALKARLESTARAEKAQAAALCEKVVSEMKTRVSARIHKETQRRKTALES
SSMPTKLVDCRSTNVEHSELFIVEGDSALGTARLARSSSYQALLPIRGKILNTQRASVTD
VLANAECAALIQVIGAGSGRTFDLDSARYGKVIMMTDADVDGAHIRTLLLTLFYRYMRPL
IEAGRVYAAVPPLHRVEVVRRGKPNEMVYTYSEKQLHELLDSLQEQGVSYKEPIQRYKGL
GEMDADQLAETTMDPRHRMLRRIRIEDAEAAERAFSLLMGSEVAPRKEFIIAGAHQLDTE
SIDM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgagccggactcgcactccgcccggtggcacgcgttcaccaccgcagacatattcaccc
gaaaggattcccgtggcgtcttcgaactacaccgcccgtcacctctccgtgctggaaggt
ctggaagctgtacgcaaacgcccgggcatgtacattggctccaccgactcccgcggcctg
atgcactgcctctgggagattatcgacaactcggtggatgaggcgctcgccggtttcggc
cagtccattcaggtcattttgtaccgtgacggttcggttgaggtgcgcgatgatggccgc
ggtatccccaccgacattgagccgcgcaccggcctgtccggtgtcgaggtcgtgttcact
aagctgcacgccggcggtaagtttggcggcggctcctataacgcgtccggtggtttgcac
ggtgtgggcgcttccgtggtgaacgcgctgtcttcccgtctggacgtgcaggtggatcgt
ggctcgaagacctaccagatgtccttccgccacggcattcccggcttctttgagtccggc
cgcacccccaagcccgaagatccgttcactcccgcaaccgagggcactgatgctctgcag
attgtgggtcgcgctaagcgcggcgtgaccggcacccgtgtgcgctattgggctgacccg
cagattttcacccccgacgctaagttcagctacgaggacttggctgctcgtgtgcgccag
accgcgttcctcattccgggtctgcgtatttgcatccgcgatgagcgccgcctgcccggc
acccccggcgagttggagccccacgaggaagttttccagtacgacggcggcattagtgag
ttcgtcgagtttctggcgcacgatgagcgtattaccgacacctggcgttttagcggcagc
ggatctttcaccgagaccgtgccggtgctgggtgaggacggccgctcgcagctgaccgac
gtggagcgcgattgcgaagtggacgttgcgctgcgctggggcattggctacgagacgacg
gtccgcagcttcgtgaatattattgccacccccaagggcggtactcacaccaccggtttt
gagcagggcctgctgcgcgtgatgcgcaagcaccttgccgataatgcccgcaagtacaag
gtgggtaacgacaagattgagaaggatgacgtgctcgccggcttgaccgccgtgctgacc
gtgcgtcttgccgagccgcagtttgagggtcagaccaaggagattctgggtaccccggcg
gttcgccagatcgtgtcgaaggtcgtgggtgatgcgctgaaggctcgcctggagtcgacc
gcccgtgcggagaaggctcaggcggccgctctgtgcgagaaggtcgtctctgagatgaag
acccgcgtctcggcgcgcatccataaggaaactcagcgccgtaagaccgcgctggagtct
tcgtccatgcccactaagctggtggactgccgttcgaccaatgtggagcattctgagctg
ttcattgtggagggtgactcggcgctgggtactgcgcgtctggcgcgttcttcttcgtat
caggctctgctgccgattcgcggtaagattctgaacactcagcgtgcttcggtgactgat
gtgcttgcgaatgctgagtgtgcggcgctgattcaggtcatcggtgcaggctcgggtcgt
acctttgatctggactctgctcgctacggcaaggtcattatgatgaccgatgcggacgtg
gatggcgcccatattcgtaccctgctgctgactctgttctaccgttacatgcgtccgctg
attgaggcgggtcgcgtgtacgctgcggttccgcccctgcatcgcgtggaggtggtgcgc
cgcggcaagccgaacgagatggtgtacacctactcggagaagcagctgcacgagcttctg
gattctttgcaggagcagggtgtgtcctataaggaacccattcagcgctataagggtctg
ggtgagatggacgctgaccagctggctgagacgacgatggatccgcgtcatcgtatgttg
cgccgtattcgcattgaagatgcggaggctgccgagcgtgcgttctccttgttgatgggt
tctgaggtggctccgcgtaaggaattcatcattgcgggtgctcatcagctggatactgag
agcatcgatatgtag
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