Rothia mucilaginosa: RMDY18_13510
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Entry
RMDY18_13510 CDS
T01144
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rmu
Rothia mucilaginosa
Pathway
rmu00470
D-Amino acid metabolism
rmu00550
Peptidoglycan biosynthesis
rmu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RMDY18_13510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RMDY18_13510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmu01011
]
RMDY18_13510
Enzymes [BR:
rmu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RMDY18_13510
Peptidoglycan biosynthesis and degradation proteins [BR:
rmu01011
]
Precursor biosynthesis
Amino acid ligase
RMDY18_13510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Pyr_redox
XdhC_C
TrkA_N
ThiF
Motif
Other DBs
NCBI-ProteinID:
BAI65183
UniProt:
D2NU57
LinkDB
All DBs
Position
complement(1517741..1519327)
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AA seq
528 aa
AA seq
DB search
MSTNEQPDTARIEANAAAIAVNPVYENERLAELTHWGAPWANLRVVVVGMGTSGDAVTDV
LAQLGAKIVVIDGADTPEKRERIDLYANAYGNVEGLFGPEHMRALPPVDGQEPELVVTSP
GVRPDHPVMLDAYERRIQIWGDVELAWRLNERNDRPTPKWLCLTGTNGKTTTVGMVDSIL
KAAGKKSIQVGNVGMPIVYAIADDEPYEFFAVELSSFQLHWTYSMSPYASVVLNIAEDHV
DWHGSFDGYKADKARVYEHTQVACIFNTDHVDTLRMVENADVIEGARAIGFSSTEMPAVS
MLGLAEDIMVDRAFLKNRYNEAYELAVLEDLAPAPGKMPAKHTVENALAAAALCRAADID
PKAVGAGLRSFKTGAHRNQLVGYANDIMWVNDSKATNPHAANASMSGYPSLVWIAGGLSK
GVEYDELIAAHAKRLKAVLIIGTDTAALKSALANHAPQVPTYNMTAAVADSSDGVAVMNA
AVAKAAELAHPGDTVLMAPASASMDQFKNYAVRGDAFANAVAAQLADS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaatgaacagccggatacagctcgcattgaagcgaacgccgccgctattgcg
gtgaacccggtgtatgagaacgagcgcctcgcggaactgactcactggggtgcgccctgg
gctaacctgcgcgtggtcgtggtgggcatgggtaccagcggcgacgctgtgaccgatgtg
ctcgcccagctgggtgcgaagattgttgtcatcgacggggcagataccccggagaagcgt
gaacgcatcgacctgtacgctaacgcatacggcaacgttgagggtctgttcggtcccgag
cacatgcgtgcactaccccccgtggacggtcaggaacccgagcttgtagtgacctccccg
ggcgtgcgtcccgaccacccggtcatgctggacgcttatgagcgccgtatccagatttgg
ggcgatgtggagctggcgtggcgcctgaatgagcgcaacgaccgcccgactcccaagtgg
ctgtgcctgaccggtacgaacggtaagaccaccaccgtgggcatggtcgattccatcctg
aaggctgccggtaagaagtctattcaggtgggtaacgtgggcatgcccatcgtgtacgcc
attgcagacgatgagccctatgaattcttcgcggtggagctgtccagtttccagctacac
tggacctactcgatgtccccgtacgcttcggtggttctgaacatcgctgaggatcacgtg
gactggcacggctccttcgacggctacaaggctgataaggctcgcgtgtacgagcacact
caggttgcctgcatcttcaacaccgaccatgtggacaccctgcgcatggttgagaacgcg
gacgttattgagggcgctcgcgcgattggcttcagctccactgagatgcccgccgtgtcg
atgctcggcctggctgaggacattatggtggaccgcgccttcttgaagaaccgttacaac
gaggcgtatgagctggcggttctggaggatttggctccggctcccggtaagatgcctgcg
aagcacaccgtggagaacgctctggcggctgcggcgctgtgccgtgcggctgatattgac
ccgaaggctgtgggcgcgggcctgcgttctttcaagaccggtgcgcaccgcaaccagctg
gtgggctacgcgaacgacatcatgtgggtgaacgattcgaaggctacgaatcctcacgcc
gcgaacgcgtcgatgagcggctacccctcgctggtgtggattgctggcggcctgtcgaag
ggcgttgagtacgatgagctgattgctgctcacgctaagcgtctgaaggctgtgctgatt
atcggtactgatactgcggcgctgaagtcggcgttggctaaccatgctccgcaggttccg
acctacaatatgaccgccgctgtggctgattcttcggacggcgttgccgtgatgaacgcg
gccgttgcgaaggctgctgagctggcgcatccgggggataccgtactgatggctcccgcg
tctgcttcgatggaccagttcaagaattatgcggtgcgcggtgatgcgtttgcgaacgct
gttgccgcccagctggcagactcttag
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