Rothia mucilaginosa: RMDY18_16430
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Entry
RMDY18_16430 CDS
T01144
Name
(GenBank) succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rmu
Rothia mucilaginosa
Pathway
rmu00020
Citrate cycle (TCA cycle)
rmu00190
Oxidative phosphorylation
rmu00650
Butanoate metabolism
rmu00720
Other carbon fixation pathways
rmu01100
Metabolic pathways
rmu01110
Biosynthesis of secondary metabolites
rmu01120
Microbial metabolism in diverse environments
rmu01200
Carbon metabolism
Module
rmu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rmu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RMDY18_16430
00650 Butanoate metabolism
RMDY18_16430
09102 Energy metabolism
00190 Oxidative phosphorylation
RMDY18_16430
00720 Other carbon fixation pathways
RMDY18_16430
Enzymes [BR:
rmu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RMDY18_16430
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
FAD_oxidored
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-ProteinID:
BAI65475
UniProt:
D2NPA7
LinkDB
All DBs
Position
complement(1846794..1848557)
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AA seq
587 aa
AA seq
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MQVHKYDVVIVGAGGAGMRAAIEAGQRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVRHNVEFYNEFYVLDLILVKDEEGKPRPAG
VVSYDLATGEVHVFQAKSVIFASGGCGKIFKTTSNAHTLTGDGMAIALRAGLPLEDMEFV
QFHPTGLAGLGILVTEGARGEGGILRNADGERFMERYAPTIKDLAPRDIVARAMANEVRE
GRGCGPHKDYVLLDLTHLEPSHIDEKLPDITEFARTYLAVEPHHQPIPVFPTAHYAMGGI
PTNNETEVYRNSEETIPGLYAAGEVACVSVHGANRLGTNSLLDINVFGKRAGRKAAEYAA
SAEFVPVPDDAADRVLNMLNGILEGKGTEKVGAIRADLQKAMEADMQVFRTDETIRAALA
TIAELEERYKNISIQDKGKRFNLDLLEAVELGFLIELAKVMSVGALHRKESRGGHYREDF
PKRDDVNFMKHSMVYLDPESEFEGVKGLRFDTKPVVYTRYEPKERKY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtacataagtacgatgtagtgatcgtcggtgccggtggcgcaggtatgcgtgcc
gccattgaggccggtcagcgagttcgcaccgcggtactgaccaagctataccccacccgc
tcccacaccggtgcggcacagggtggcatgtgcgccgctctggctaacgttgaagaggac
aactgggagtggcacacctttgacaccgtcaagggtggcgactacctggtcgaccaggac
gcagcagaaatcatggctaaggaagctattgacgctgtgctcgacctggaaaagatgggt
cttcccttcaaccgaacccccgaaggccgcattgaccagcgccgtttcggcggtcacacc
cgtgaccacggtaaggctgctgtgcgccgcgcgtgctacgcagctgaccgtaccggccac
atgattctgcagaccctctaccagaactgcgttcgccacaatgtggagttctacaacgag
ttctacgttctcgacctgatcctagtcaaggacgaagagggcaagccccgccccgccggc
gtcgtctcctacgacctggcaaccggcgaggtccacgtcttccaggctaagtccgtgatt
ttcgcatccggcggttgtggcaagatcttcaagaccacctccaacgcgcacaccctcacc
ggtgacggcatggctatcgcactgcgtgcaggcctgcccctggaggacatggaattcgtt
cagttccatccgaccggcctggctggcctgggcattctcgtcaccgagggtgctcgtggt
gaaggcggtattctccgtaacgctgacggtgagcgcttcatggagcgctacgcacccacc
attaaggacctcgcaccccgcgatatcgtggcacgtgcaatggcaaacgaggtgcgcgaa
ggccgcggttgcggtccccacaaggactacgtgctgctggacctgacccacctggagccc
tcccacatcgacgagaagttgcccgatattaccgagttcgctcgtacctacctggcagtg
gaaccgcaccaccagcccatcccggtgttccccaccgcgcactacgcaatgggcggtatc
cccaccaacaacgagaccgaggtctaccgcaacagcgaagagaccatccccggcctctac
gcagctggtgaggttgcttgcgtgtccgtccacggtgcaaaccgtctgggcaccaactcc
ctgctggacatcaacgtgttcggtaagcgtgcaggccgcaaggcagcagagtacgcagca
tccgctgagttcgtacccgttccggacgacgcagcagaccgcgttctgaacatgctcaac
ggcatcctcgaaggcaagggcaccgagaaggtcggcgctatccgcgcagacctgcagaag
gctatggaagctgacatgcaggtgttccgtaccgacgagaccatccgcgcagcactggca
accatcgctgaactggaagagcgttacaagaacatctccatccaggacaagggcaagcgc
ttcaacctcgacctgcttgaggctgttgaacttggcttcctgattgagctggcaaaggtc
atgtctgttggcgcactgcaccgtaaggaatcccgtggtggtcactaccgcgaggacttc
cccaagcgtgacgacgtcaacttcatgaagcactcgatggtctacctcgaccccgaatct
gagtttgagggtgtcaagggcctgcgattcgacaccaagcccgttgtctacacccgctac
gagccgaaggagcgtaagtactaa
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