Rothia mucilaginosa: RMDY18_16670
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Entry
RMDY18_16670 CDS
T01144
Name
(GenBank) superfamily II DNA/RNA helicase
Organism
rmu
Rothia mucilaginosa
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BAI65499
UniProt:
D2NPD1
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Position
1866918..1871084
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AA seq
1388 aa
AA seq
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MTGDKAQARTIRDNELVSANNPFPEIPVTVPQIIRQAGHRTYQRGLAYQRNREVIRYSYD
EDERTLTGLVNGSTIIPYEVTVRFFPAVSGSATFTARCTCPVLTDCKHAVALMLTALDRA
SVAKKALSEHPGPVGVPGAATEGAAAKDAAEAKGSAGSKSADIAEAKKSADPLAALRASG
ALTTAAKLPAPDAETAEPKNPQESFALNELGSSPNVLDGTASKISAWRRDLSSVLSARQD
LAGIDSMRVSGALDFSLSVSGSYARGRNMPGATPSINLLARPLMASKTGRWIKGGLSWET
FASSVGGPVGRHEIYPEHERFFAELYSIARPWQNMYSSHRDWISISASASTLLWDVLARA
EDIGLPLLINGREVNYAVLSPAQVRLHASAEKHAEGAGLQLQAALSWEGREGELLRQLWL
PAAHCHPIGTPRTGFFALGGLAQQEYEQAAKAVHWKTARPGALDEVGRESFVQKDAREVP
AESPTPTINPAQNNPAQGERVRYSPAVPELPEGVELALIPLVEPLDAASESLISAGTVHI
PAAERATFQKEYLPALSRSIPSLTPDPALALPRVKPPHLVLEISFDEQVRHDAQLSWHWE
YPLNPFAEDSAEEASAQEASTQNPAAGSDVYSLPVFGYPGEEGGEIRDERFEARVLRSVR
AILAAHPALSGLEERRIEGWETRELLSAILPKLRRVSAVQVRFNGTAPEFVEATDALIEI
TVSEGNSRDWFGLGIAVKVNNWTVPFAQIFEALDRGADRILLGNGTYFSLRRPEFKTLRT
LIAEARELDDAGDELRINRHQAGLFSELESLAASVHTTARWDAQVRSLLELVEGLEDAEE
STEESAEKTSDKGAQDSPALQKTSRKKTSRQIIPSCPVPTGLQAILRPYQVEGFQWLSFL
YEQRLGGILADDMGLGKTVQALALLAHAIEEHRAASERAAERGESVEPFAPFLVVAPTSV
IANWAAEAERFLPEAKVVTITETTAGKTPLAERVAGAHLVLTSYTLLRMDEEAYTGYART
LGRTVDEFTGEQSAPEGWGALLLDEAQFVKNTGTRAWSIARAMPAHTKIAMTGTPIENNL
MELWALLAIVADGLFPSARAFRDLYARPAESGEDPAQAAATAARLRRRIRPLMLRRTKEL
VAAELPAKNDTRVNLPLAPGHRRIYDTHLQRERQKVLGLLEDMDKNRFTIFQSLTLLRRL
ALDAALIDPEAYAGVSSVKRDYLVQQLPDLLEKGHRVLVFSQFTGYLKSISARLAKEGIG
HLYLDGSTRNRAEVIEAFTSGQEPVFLISLKAGGFGLNLTEADHVFIMDPWWNPAAEQQA
VDRIHRIGQDKEVHVYRLVAEGTIEEKVMQLKESKAALFDAVVGEGEFASAAVTAEDVRE
LFAPAVER
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgacaaggcgcaagcccgcacaatacgcgataatgagctggtgagcgccaac
aaccccttccccgaaattcccgtcaccgtaccgcagatcattcgccaggccgggcaccgc
acctaccagcgcggcctcgcctaccagcgcaaccgcgaagtcatccgctacagctacgac
gaagacgagcgcaccctcaccgggctcgtcaacggaagcaccatcatcccctacgaagtg
accgttcgcttcttccccgccgtcagtggctccgcaacattcaccgcccgctgcacctgc
cccgtgctcaccgattgcaagcacgccgtagcgctcatgctcactgcgctcgaccgcgcc
tccgtagcgaaaaaggcactcagcgaacaccccggaccggtcggcgtacccggtgccgca
acggagggtgccgctgcgaaggacgcggcagaggcaaagggatccgcaggttcaaagagc
gcggatattgcggaggcgaagaagtccgccgacccgctcgcggcgctgcgcgcctccggt
gcgctcaccaccgcggcaaaactgcccgcgcccgacgcagagactgccgagcccaaaaac
ccccaggaaagctttgcgctcaacgagctgggctcttcccccaacgtgctggacggtacc
gcctccaaaatttctgcctggcggcgcgacctctcctccgttctttccgcacgtcaggac
cttgcgggcattgattcgatgcgcgtgagcggcgctctggatttctcgctgagcgtctcc
ggctcctacgcgcgcggccgcaatatgcccggcgcaacccccagcattaacctgctcgcc
cgcccgctcatggcgtccaaaaccgggcgctggatcaagggcggactcagctgggaaacc
tttgcctccagcgtgggcggacccgtcggacggcacgaaatctaccccgaacacgaacga
ttcttcgccgagctctactcgattgcccgcccctggcagaacatgtattcctcgcaccgc
gactggatttcgattagcgcatctgcctccactctgctctgggatgtactcgcccgcgcg
gaggatattggcctgcccctgctgatcaacggtcgcgaggtgaactacgccgtgctgagc
ccggcacaggtgcgcctgcacgccagcgctgagaagcacgcagaaggcgccggcctgcag
cttcaagccgcgctcagctgggaaggacgcgaaggcgaactactgcgccagctctggctg
cccgccgcgcattgccaccccatcggcaccccgcgtaccggcttctttgccctgggcggg
ctcgcccagcaggagtacgagcaggcggcaaaggcggtgcactggaagaccgcgcgcccc
ggtgcgctggatgaagtgggccgtgagtctttcgtgcaaaaggacgcgcgggaggtgcct
gctgagtcccctaccccgaccatcaacccggcgcagaataatccggcacagggtgaacgg
gtgcgctactcccccgccgtacccgaactgcctgagggtgtggagctggcgctcatcccc
ctggttgagccgctcgatgccgcctccgaatcgctgattagcgccggaaccgtgcatatt
cctgccgcggaacgcgccacgttccagaaggagtacctgcccgcgctcagccgttccatt
ccctcgctgacccccgatccggcgctggcgctacctcgcgtgaagccgccgcatctggtg
cttgaaatcagctttgacgagcaggtacgccacgacgcgcagctgagctggcattgggag
tacccactgaaccccttcgcggaggacagtgcagaggaggcgagcgcgcaagaggcgagc
acacagaatcctgcggccggctccgatgtgtactccctgcccgttttcggttaccccggt
gaagagggcggcgagattcgtgatgagcgttttgaggcgcgcgtactgcgttcggtgcgc
gcaattcttgccgcccatccggcgctttccgggctggaggagcgccgcatcgaaggctgg
gaaacccgcgagctgctcagcgcgattctgccgaaacttcgccgtgtttccgctgttcag
gtgcgttttaacggcaccgcaccggagttcgtggaggcaaccgacgcgctcattgaaatc
accgtgagcgagggcaattctcgcgactggttcggcctgggcattgcggtaaaggtcaat
aactggaccgtgccgttcgcccagatttttgaggcactcgatcgcggggcagaccgtatt
ctgctcggtaacggtacctatttttcgctgcgtcgacccgagtttaagaccctgcgcacc
ctcatcgcggaggctcgcgaacttgacgatgcgggcgatgagttgcgcattaaccggcac
caggcggggctgttctctgagctggagtcgttggcggcgagcgtgcatacgaccgcgcgg
tgggatgctcaggtgcgttcgctactggagctggttgagggcctggaggatgccgaggaa
agcaccgaagaaagcgccgaaaagacctctgacaagggcgctcaggattcccccgcgctc
cagaagacctctcgcaagaagacttcccgccagattattccgagctgcccggtacccacc
ggcctgcaggcgatcctgcgcccctaccaggtggagggtttccagtggctgtcgttcctg
tacgagcagcgtctgggcggtattctcgccgacgatatgggtctgggtaagaccgtgcag
gctctcgccctactcgcccacgcgatcgaggagcatcgtgccgcctccgaacgtgccgcc
gagcgcggtgagagcgtcgagccgttcgcgcccttcctcgtggttgcgccgacctccgtc
atcgccaactgggcggcggaggcggaacgcttcctgcccgaggcgaaggtcgtgaccatt
accgaaaccaccgccggtaagaccccgctggctgagcgggttgccggggcgcacctggtg
ctgaccagctatacgctgttgcgcatggacgaggaagcatacaccggctacgcccgcacg
ctaggccgtaccgttgacgaattcacgggcgagcagtccgcccccgaaggttggggtgcg
ctcctgctggacgaggcgcaattcgtcaaaaacaccggcacccgcgcctggtccatcgcc
cgcgcgatgcccgcccacaccaagattgcgatgaccggcacgcccattgagaacaatctc
atggagctgtgggcgctgctggcgattgtggcggacggtctgttcccctccgcccgtgcg
ttccgtgacctgtacgctcgcccggcggagtccggcgaggacccggcgcaagccgcggcg
acggctgctcgtctgcgccggcgcatccgcccgctcatgctacgccgcaccaaggagctg
gtggcggcggagcttccggcgaagaacgatacgcgcgtgaacctgccactggctcccggt
caccgccgcatctatgacacgcatctgcagcgtgaacgtcagaaggtgctgggtctactg
gaggatatggacaagaaccggttcacgatcttccagtcgctgaccctgctacgccgtcta
gcgctcgatgccgcgctgattgatccggaagcctacgccggggtgtcgtcggtcaagcgt
gactacctggttcagcagctgcccgacctgctcgagaagggccaccgagtgctggtgttc
agccagttcaccggctacctcaagagcatttcggcacgcctggctaaggagggcatcggt
cacctgtacctggacggttctacccgcaaccgtgccgaggttatcgaggcgtttacgagc
gggcaggagccggtgttcctcatttcgctcaaggctggcggtttcggcctgaacctgacc
gaggcggaccacgtgttcatcatggatccgtggtggaaccccgccgccgagcagcaggcg
gtggaccgtattcaccgcatcggccaggacaaggaggtgcacgtctaccgtctggttgcc
gagggcaccattgaggagaaggtcatgcagctcaaggagtcgaaggccgcgctcttcgat
gcggtggtcggtgagggcgagttcgcctccgcggcggtgacggctgaggatgtgcgtgag
ctctttgcgccggctgtcgagcggtag
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