Rothia mucilaginosa: RMDY18_17720
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Entry
RMDY18_17720 CDS
T01144
Name
(GenBank) recombinational DNA repair protein
KO
K06187
recombination protein RecR
Organism
rmu
Rothia mucilaginosa
Pathway
rmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RMDY18_17720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmu03400
]
RMDY18_17720
DNA repair and recombination proteins [BR:
rmu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RMDY18_17720
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RMDY18_17720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
PHF5
Motif
Other DBs
NCBI-ProteinID:
BAI65604
UniProt:
D2NPN6
LinkDB
All DBs
Position
1998061..1999215
Genome browser
AA seq
384 aa
AA seq
DB search
MYEGAVQNLIDELGRLPGVGPKSAQRIAFHILNADAADMARLANAISTVKTSVSFCEECG
NVSETKLCTICRDERRDPSVLCVVEESKDVVAIERTRSFTGRYHVLGGAINPLAGVGPEQ
LRIRELVSRLADERIQEIILAMDPNLEGEATATYLSRMLVPLGVRLSRLASGLPVGGDLE
YADEITLGRALEGRRVISEGTAVAHTAAEDFERVNREQEQEREQAAQVQAQEAKQSRRRW
NSSMFDDLDSEDSAGSRTEAPTAEGVQGTVDEQLIEQVLQEAEESGEEASPTDSGAGSTP
EATEAEATPDLGEDSAEEAPASAAPDPAEAPTEAPATEQSEDAPEVFRTPDYEEKIRSIQ
NAPLRTPKPDVPPLPGVTYVNPWT
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagggagcagttcaaaacctcattgacgagctcggccgcctgccgggtgtgggc
cccaagtcggctcagcgcatcgcttttcacattctgaatgcggatgctgccgatatggcg
cgcctagccaacgccatttccacggtgaagaccagcgtgagcttctgtgaggagtgcggt
aacgtctccgagacgaagctgtgcacaatctgtcgtgatgagcgccgcgacccgtccgtg
ctgtgtgtggtcgaggagtcgaaggacgtggtggcgattgagcgcacccgttcctttacc
ggccgctaccatgtgcttggcggtgccattaacccgctggcgggtgtgggcccggagcag
ctgcgtattcgtgagctggtgtcccgcctggcggatgagcgtatccaggagattattctg
gcgatggacccgaaccttgagggtgaggcgaccgcaacctacctttcgcgtatgctcgtg
ccgctgggtgtgcgtctgtcgcgtctggcgtcgggcctgccggtcggtggcgatttggag
tacgcggacgagattaccctgggccgcgcgctggagggccgccgcgtcattagcgagggc
acggcggtggctcatactgccgccgaggattttgagcgcgtgaaccgtgagcaggagcag
gagcgtgagcaggcggctcaggttcaggctcaggaggcgaagcagagtcgtcgccgctgg
aattcgagcatgtttgatgacctggattctgaggattctgccggttcccgcacggaggcg
cccaccgccgagggtgtgcagggcacggtggatgagcagctgattgagcaggttctgcag
gaggctgaggaatcaggcgaggaagcctcccccaccgattctggtgcgggctctacgcct
gaagccacagaagcagaagcaacccctgacttgggcgaagattccgccgaggaggctccg
gcgagcgccgcccccgaccccgcagaagcacccactgaggcacccgcaaccgagcagtcg
gaggacgctccggaggtgttccgcacccccgattatgaggagaagatccgctcgattcag
aacgccccgttgcgcaccccgaagccggatgttccgccgctaccaggtgtcacttacgtg
aacccgtggacctaa
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