Rothia mucilaginosa: RMDY18_17940
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Entry
RMDY18_17940 CDS
T01144
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rmu
Rothia mucilaginosa
Pathway
rmu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rmu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RMDY18_17940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmu02000
]
RMDY18_17940
Transporters [BR:
rmu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RMDY18_17940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
BAI65626
UniProt:
D2NPQ8
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All DBs
Position
complement(2022664..2024373)
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AA seq
569 aa
AA seq
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MTHLRINRRTLLTGTVALGTVGLLAACGGGSDKKISGKAASSTEEIVKNLEINKQDRSSL
KQGGEFRGSVSAVGPNFNILTQSGYTTENLTAFGGACNIPSAIGFTSLSPAGEYSLNDDY
VSDYKAETVGGVQTITFKLNSKAVFNDGTPVDIEAIRAAWTVYRNPDDGYNVIAAPFWQQ
VASIDPVDGDKTRVKIVMSKPLYPAETLGLLGLHPALTDKELFNNGFVNKPMDQYWSGPF
KIGEWNSSAKTLTLVPNDKWWGEKPLLDRIIWREMGDEAERAAFKNGELDSIGFAGLATY
NAVKGQPGVQIRSGQSVGVINLQFNPTRVTDTALRRAVFAAVDRSQLAKVKFGQINWEEP
LTGSLIAMPFQKGYQDAMPSNPGAEAAAKILEAAGYSKNGDYYAKDGKTAGFSITYFGSD
ATSLAQFQNLEQQLKAAGIKLEQDNQPQSQFNSVMGAKQYDCAFSGWGIGADPADSVQYF
YTSEINEGVGDPELDKFIASIYEKESHEEQLKMAAEAEKQHMEKVAIYFPYANGPSYAAV
KEKLANYGPSLFATSYTDPKRWVNVGWQN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgactcatctacgtattaatcgccgtaccctgctgaccggcaccgttgccctgggtacc
gtcggcctgctcgctgcctgcggcggcggctctgacaagaagatcagcggtaaggctgca
tcaagcaccgaggaaatcgtcaagaacctcgaaatcaacaagcaggaccgctcctccctc
aagcagggtggcgagttccgcggtagcgtctccgcagtcggcccgaacttcaacattctg
acccagagcggctacaccaccgagaacctcaccgcattcggtggcgcctgcaacatcccc
tccgctatcggcttcacctccctgagccctgctggcgaatacagcctcaacgacgactat
gtcagcgactacaaggcagagaccgttggcggcgtgcagaccatcaccttcaagctcaac
tctaaggctgtcttcaacgacggcacccccgttgacattgaggcaatccgcgccgcatgg
accgtctaccgcaaccccgatgacggctacaacgtcatcgccgctcccttctggcagcag
gtggcgtccatcgaccccgtggatggcgacaagacccgtgtcaagatcgtcatgtccaag
cccctgtaccccgccgagaccctcggcctgctcggtctgcaccccgcactgaccgacaag
gagctcttcaacaacggcttcgtgaacaagcccatggatcagtactggtccggccccttc
aagattggcgagtggaactcttcggctaagaccctcaccctcgtgcccaacgacaagtgg
tggggcgagaagcctctgctggaccgcatcatctggcgcgaaatgggcgacgaggcagag
cgcgcagcgttcaagaacggcgagctggacagcatcggctttgctggcctggcaacctac
aacgctgtcaagggtcagcccggtgttcagattcgctccggccagagcgttggcgtgatt
aacctgcagttcaacccgacccgcgtgaccgacaccgccctgcgccgtgcagtcttcgcc
gcggttgaccgctcccagctggctaaggtcaagttcggccagatcaactgggaagagccc
ctgaccggctccctgattgctatgcccttccagaagggctaccaggacgctatgccctct
aaccccggtgccgaggctgcggcaaagattctggaggcagcaggctactccaagaatggc
gactactacgccaaggacggcaagactgcaggcttctccatcacctacttcggttcggat
gcaacctccctggctcagttccagaacctcgagcagcagctcaaggcggcaggtattaag
ctcgagcaggacaaccagccgcagtcccagttcaactccgtgatgggtgctaagcagtac
gactgcgccttctccggttggggcattggtgctgaccccgcagatagcgttcagtacttc
tacaccagcgaaatcaacgagggtgtaggcgatcctgaactggataagttcatcgcgtcc
atttacgagaaggaatcccacgaggagcagctgaagatggctgctgaggctgagaagcag
cacatggagaaggttgctatttacttcccctacgctaacggccccagctacgcagctgtg
aaggagaagctggctaactacggtccttccctcttcgcaaccagctacaccgaccccaag
cgctgggtcaatgtgggttggcagaactaa
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