Roseomonas mucosa: FOB66_05550
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Entry
FOB66_05550 CDS
T06208
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rmuc
Roseomonas mucosa
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmuc03400
]
FOB66_05550 (addB)
Enzymes [BR:
rmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOB66_05550 (addB)
DNA repair and recombination proteins [BR:
rmuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FOB66_05550 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QET92356
LinkDB
All DBs
Position
4:complement(503143..506247)
Genome browser
AA seq
1034 aa
AA seq
DB search
MGGKSANHRESMNLHEIPAHLPFLDALARGVVRLAGAEDPAAPDPTILARATILLPTRRA
ARSLRESFLRAAGQVNGAQALLLPRLRPLAGLSVEDAEELSLPALMDQPPAVDPARRLAV
LTALVMRLPPNYGGPSHPDQAWRLAQELATLLDEMALEDCDPARLPSLVPDRLARHWQIT
HVFLNGVIQEWQAWLAKQGLSDIGTRRVATIRAQTALWKENPPEDLVIAAGIGLGGTIPA
AAELLKVLAHCPNGHVVLHGAGEPLPPQPWDELCASHTHPLCGQVRLLQAMGATPGDLRP
WPPPGPHGLPPDPAGEARGTLLARALRPPGDIACWQEKAPERWAPALDHLTLLTAPDEAG
EAAAIALLLREALETPGSRAALVTPDRDLARRVCVELARHGVLADDSAGQPLAQTPTGAF
LRLIARMVAEEFSPVALLACLKHPSCAGGMARADWLRALRDLERHALRGPRPAPGLAGLR
AATARAFAEPGAEAPAESEARRQARLERQARTTALLDALERALGGFTDLPEIGRPPAAVL
EGLLDAAEALAATDSEPGGLRLYAGEEGEPLAVHLASLGPAMECLPPVSAAAWPALFDAL
LEGPLAPGVRNMRGRQGGSHPRVQVLGLLEARLQSFDRVVLGALEETVWPIATDPGAWMS
RPMRREFGLPAPEARIGRVAADFMMSALSAPDVVLSHARKRGGSPSVQARWLTRLQIFLH
GQGLRIEASPATGWAERLDMPEVVLPCPRPAPAPPVLLRPRRLTVTDVWDLKADPYAWYA
KRVLRLRPLDPLDAEADGAAFGSVVHDAVAAWTRRCAGAYGDRALEWFGEAVEEAIRRHS
PRPGLAAFWRPRLRRIGEFLLATERERPEVRERHPEQSGQIELPCGVRLEGRADRLDILA
DGGLAILDFKTGAPPAQIAIQDGRAPQLPLEAAMALKGGFPDIAPATVSALEHWKLSGTI
EEGERLVFKPRGDVTVTEVAEAAWRQVDVLAREFLLGDRPFLARPHPGRSPRNTDYEHLS
RQREWGGAEEAGAE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgggagggaaatcggctaaccatcgggaatccatgaaccttcacgagatcccggcccac
ctcccctttttggacgccctggcccggggggtggtgcgcctcgccggggcggaggatccg
gccgccccggatcccaccatcctggcccgcgccacgatcctgctgcccacccggcgcgcc
gcccgcagcctgcgcgagagcttcctgcgcgccgccgggcaggtgaacggggcgcaggcc
ctgctgctgccgcgcctgcgccccctggccgggctttcggtggaggatgcggaggagctt
tccctccccgccctgatggaccagcccccggcggtggacccggcgcggcgtctcgcggtg
ctgaccgcgctggtgatgcgcctgccgccgaactacggcggcccctcgcatcccgaccag
gcctggcggctggcgcaggagctggcgacgctgctggacgagatggcgctggaggattgc
gaccccgcccgcctgccctccctggtgccggaccggctggcccggcactggcagatcacc
catgtcttcctcaacggcgtgatccaggaatggcaggcctggctggcgaagcagggcctc
tccgacatcggcacccgccgcgtcgccaccatccgcgcccagaccgcgctgtggaaggag
aacccgccggaggatctggtgatcgccgccgggatcggcctgggcggcaccatccccgcc
gccgccgagttgctgaaggtcctggcgcactgccccaacggccatgtggtcctgcacggc
gccggcgagccgctgcccccgcagccatgggacgagctctgcgccagccatacccacccc
ctctgcggacaggtgcggctgctccaggccatgggcgccacgccgggcgacctgcggccc
tggcctcccccggggccccacggcctgccgcccgacccggccggggaggcgcgcggcacc
ctgctcgcccgcgccctgcgcccgcccggcgacatcgcctgctggcaggagaaggcgccg
gaacgctgggccccggccctcgaccacctcaccctcctcaccgccccggacgaggccggc
gaggccgccgccatcgccttgctgctgcgcgaggcgctggaaacccctggcagccgcgcc
gccctggtgacgccggaccgcgacctcgcccgccgcgtctgcgtggagctcgcccgccat
ggcgtgctggccgatgattccgccggccagcccctggcccagaccccgaccggcgccttc
ctgcgcctgatcgcgcgcatggtggcggaggaattctcccccgtcgccctgctcgcctgc
ctgaagcacccctcctgcgccggcggcatggcgcgggccgactggctgcgcgcgctgcgc
gacctggagcgccacgcgctgcgcggtccccgccccgctcccggtctcgccgggctccgc
gccgccacggcacgcgccttcgccgagccgggcgccgaggccccggccgaaagcgaggca
cggcggcaggcccggctggaacgccaggcccgcaccaccgccctgctcgatgcgctggaa
cgcgccctgggcggcttcaccgacctgcccgagatcggccgcccgcccgcggccgtgctg
gaaggcctgctcgacgccgccgaggccctggccgccaccgacagcgagcccggcgggctg
cgcctctatgccggggaggagggcgagcccctggccgtgcatctcgcctcgctcggcccg
gccatggaatgcctgccccccgtctcggccgccgcctggcccgcgctgttcgacgcgctg
ctcgaagggccgctggccccgggcgtgcgcaacatgcgcgggcgccagggcggcagccat
ccgcgggtgcaggtgctgggcctgctggaggcgcggctgcaatccttcgaccgcgtggtg
ctgggcgcgctggaggaaaccgtctggcccatcgccaccgatcccggcgcctggatgagc
cgcccgatgcgccgcgagttcggcttgccggcgccggaggcccgcatcggccgcgtcgcc
gccgatttcatgatgagcgccctgtccgccccggacgtggtgctgagccatgcccgcaag
cgcggcggcagcccgtcggtgcaggcacgctggctgacccggctgcagatcttcctgcac
ggccagggcctgcggatcgaagcctcgcccgccaccggctgggcggagcggctggacatg
ccggaggtcgtcctcccctgcccccgcccggccccggccccgccggtgctgctgcgcccg
cgccgcctgaccgtcaccgatgtctgggacctgaaggccgatccctatgcctggtacgcc
aagcgcgtactgcggctgcgccccctcgatccgctggatgccgaggccgacggcgccgcc
ttcggctcggtggtgcatgacgcggtggcggcctggacccgccgctgcgccggtgcctat
ggcgaccgggccctggaatggttcggggaagcggtggaggaagcgatccgccggcactcc
ccgcgccccggcctcgccgccttctggcgcccgcgcctgcgccgcatcggcgaattcctg
ctggccaccgagcgggaacgccccgaggtgcgggaacgccaccccgaacagtccggccag
atcgagctgccctgcggcgtgcggctggaagggcgcgccgaccggctggacatcctggcc
gatggcggcctcgccatcctcgacttcaagaccggcgcccccccggcccagatcgccatc
caggacggccgcgcgccgcagctgccgctggaggccgccatggcgctcaagggcggcttc
cccgacatcgcccccgccacggtttcggcgctggagcactggaagctctcgggtaccatc
gaggaaggcgagcgactcgtcttcaagcccaggggcgacgtgaccgtgacagaggtggcc
gaggcggcatggcggcaggtggacgtgctggcacgggaattcctgctgggcgaccgtccc
ttcctggcgcgcccgcatccgggccgcagcccccgcaacacggattacgaacacctgtcc
cgccagcgcgaatggggcggggccgaggaagcgggcgcggagtga
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