KEGG   Roseomonas mucosa: FOB66_06885
Entry
FOB66_06885       CDS       T06208                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rmuc  Roseomonas mucosa
Brite
KEGG Orthology (KO) [BR:rmuc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmuc03400]
    FOB66_06885
Enzymes [BR:rmuc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FOB66_06885
    5.6.2.6  RNA 3'-5' helicase
     FOB66_06885
DNA repair and recombination proteins [BR:rmuc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FOB66_06885
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QET92586
LinkDB
Position
4:complement(804311..806881)
AA seq 856 aa
MRTLPEPFAGWFAARGWTPRPHQMALLEAAEAGRSALLIAPTGGGKTLAGFLPSLTDLAQ
GRPDQGATRGLHTLYISPLKALAVDIARNLTTPIEEMGLPIRVETRTGDTPANRRQRQRE
NPPEILLSTPESLVLLLSLPDAAEIFGRLRAVVVDEVHALAGTKRGDQLALCLSRLQRLS
PGLRRIGLSATVAQPEALRAWIAPDARPEGAALITGQGGADPSLEIVLPEGHLPWGGHMG
LASAPEIYRRIGGAGVTIVFVNTRAQSELIFQALWRLNDDNLPIALHHGSLQIEQRRKVE
AAMAAGRLRAVVATASLDMGIDWGAVDQVIQVGAPKGVSRLMQRIGRANHRMDEPSRAVL
VPANRFEVIECTAAIEAVAAHELDGEAPRAGGLDVLAQHVLALACHAPFRADDLYAEVTQ
AAPYAALTRRDFDDVLRFAEDGGYALHAYERFRKLFRDSVDFIHIRDERVARQVRMNLGT
ITDSPMVKVRLRGGPVLGDVEEWFVSTLELGHCFLFAGQTLRYEGMDALSVIVSRGGDEE
PRVPTYAGARLPLSTYLSRRVRAILADPRRWGALPEPVREWLRLQQRQSELPDRDGLLIE
SFPHHGRWFMVAYCFEGRLAHQTLGMLVTKRMEGMGYGPLGYLATDYVLATWSAFEPTEP
ERLFEEDILGEELEEWIAESSMLRRTFRNIATVAGLLEKNHPGAEKSGRQMTMNADLIYD
VLRKHDPDHILLRATRQEAAYGLTDVRRIAGLLARVRGRIRVRVLDRVSPLAVPALIEEG
REWVPGGAEDALLAEAAALVEEATDGAEHFAEVLSEVTEGVRIRAGVVDRPRHRKGRERR
GRGLPGPRQGARGDSV
NT seq 2571 nt   +upstreamnt  +downstreamnt
atgagaacattgccggaacccttcgcgggctggttcgccgcgcgtggctggacaccccgg
ccccaccagatggcgctgctggaggccgccgaggccgggcggagcgccctgctgatcgcc
ccgaccggcggcggcaagaccctggcgggtttcctgcccagcctgaccgatctcgcgcag
ggtcggccggaccagggggccacccgtgggctgcacacgctctacatctccccgctcaag
gcgctggcggtggatatcgcgcgcaacctgaccaccccgatcgaggagatgggcctgccg
atccgggtggagacgcgtaccggcgacacgcccgccaaccgccgccagaggcaacgcgag
aacccgcccgagatcctgctttccacgccggaaagtctggtcctgctgctttccctgccc
gatgcggcggagatcttcggaaggctgcgcgccgtggtggtggacgaggtgcatgcgctg
gccggcaccaagcgcggcgaccagctcgccctctgcctgtcgcggctgcagcgcctctcc
cccggcctgcggcgcatcggcctttccgccacggtggcgcagccggaggcgctgcgcgcc
tggatcgcgcccgatgcgcggcccgaaggcgcggcgctgatcaccgggcagggcggcgca
gatcccagcctggagatcgtgctgcccgaggggcacctgccctggggcgggcatatgggc
ttggccagcgcaccggagatctatcgccgcatcggcggggccggggtcaccatcgtcttc
gtcaacacccgtgcccaatccgaactgatcttccaggcgctgtggcgcctcaacgacgac
aacctgcccatcgccctgcaccacggctccctgcagatcgagcagcggcgcaaggtggag
gccgccatggcggcggggaggctgcgcgccgtggtggcgacggcctcgctcgacatgggc
atcgactggggcgcggtggaccaggtgatccaggtcggcgcgccgaagggcgtctcgcgc
ctgatgcagcgcatcggccgcgccaaccaccggatggacgagccctcccgcgccgtgctg
gtgccggccaaccgcttcgaggtgatcgagtgcactgccgccatcgaggccgtggcggcg
catgagctggacggcgaggcgccacgcgccggggggctggacgtgctggcgcagcatgtc
ctggccctggcctgccacgcacccttccgggcggacgacctctacgccgaggtcacgcag
gccgcgccctatgccgcgctgacgcggcgcgacttcgacgacgtgctgcgcttcgcggag
gatggcggctacgcgctgcacgcctatgagcgcttccgcaagctgttccgcgacagcgtg
gacttcatccatatccgcgacgagcgcgtggcgcggcaggtgcggatgaatctcggcacc
atcaccgacagcccgatggtgaaggtgcggctgcgcggcgggccggtgctgggcgacgtc
gaggaatggttcgtctccacgctggagctggggcactgcttcctcttcgccgggcagacc
ctgcgctacgaggggatggacgcgctctccgtcatcgtctcgcgcggcggcgacgaggag
ccgcgcgtgccgacctatgccggggcgcgcctgccgctttccacctatctctcgcgccgg
gtgcgggcgatcctggccgatccccggcgctggggcgccctgccggagccggtgcgggaa
tggctgcggctgcagcagcggcaatccgagctgcccgaccgcgacgggctgctgatcgag
agcttcccgcatcacggtcgctggttcatggtcgcctactgcttcgagggccggctggcg
caccagacgctgggcatgttggtgaccaagcggatggaagggatgggctacggcccgctg
ggctaccttgccacggactacgtgctcgccacatggagcgccttcgagcccaccgagccg
gagcggctgttcgaggaggacatcctcggcgaggaactggaggagtggatcgccgagagc
tccatgctccgccgcaccttccgcaacatcgcgaccgtcgccgggctgctggagaagaac
catcccggcgccgagaagagcgggcggcagatgacgatgaacgccgacctcatctacgac
gtgctgcggaagcacgacccggatcatatcctgctgcgcgccacccggcaggaagccgcc
tatggcctgaccgatgtgcgccgcatcgccggcctgctggcgcgggtgcgcggccgcatc
cgcgtgcgggtgctcgaccgtgtctcacccctcgccgtaccggcgctgatcgaggagggg
cgcgaatgggtaccgggcggcgccgaggacgccctgctggccgaggccgccgcgctggtg
gaggaagccaccgacggcgccgagcacttcgccgaggtgctgagcgaggtgacggaaggc
gtccgcatccgcgccggggtggtggaccgcccgcgccaccggaaggggcgggagcggcgc
ggccgcgggttgcccggcccgcggcaaggcgcccgaggggatagtgtctga

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