Roseomonas mucosa: FOB66_07655
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Entry
FOB66_07655 CDS
T06208
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rmuc
Roseomonas mucosa
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmuc03016
]
FOB66_07655 (thpR)
Enzymes [BR:
rmuc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FOB66_07655 (thpR)
Transfer RNA biogenesis [BR:
rmuc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FOB66_07655 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QET95389
LinkDB
All DBs
Position
4:complement(956350..956883)
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AA seq
177 aa
AA seq
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MRLFVALALPELLRDQLAGLAGGIPGAKWVPPGNYHLTLRFIGAIERWRAEEVDEALAAI
RARPFDLSLCGVGTFEKAGRIQSLWVGVERTEALSHLQAKVETALQRVGLEPERRRFAPH
ITLARVDRAEVPKLVSYVQAHNLFRAPPVRMEQFTLFSSLLGKEHSVYTPEVEYALA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
ttgcgactgtttgtggctctcgccctgcccgaattgctgcgcgaccagcttgccggcctc
gccggcggtatccccggggcgaaatgggtgccgcccggcaactaccacctgaccctgcgc
ttcatcggcgccatcgagcgctggcgggccgaggaggtggacgaggcgctcgccgccatc
cgcgcccgccccttcgacctgtcgctctgcggcgtcggcaccttcgagaaggccgggcga
atccagagcctctgggtcggggtggagcgcaccgaggcgctgtcgcacctccaggccaag
gtggagaccgccctgcagcgcgtggggctggagccggagcgccgccgcttcgcaccgcac
atcaccctggcgcgggtggaccgggcggaggtgccgaagctcgtctcctatgtccaggcg
cacaacctgttccgcgccccgccggtgcggatggagcagttcacgctcttctcctcactg
ctcggcaaggagcactcggtctatacgccggaagtggagtacgccctggcctga
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