Roseomonas mucosa: FOB66_08240
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Entry
FOB66_08240 CDS
T06208
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmuc
Roseomonas mucosa
Pathway
rmuc00061
Fatty acid biosynthesis
rmuc00071
Fatty acid degradation
rmuc01100
Metabolic pathways
rmuc01212
Fatty acid metabolism
rmuc02024
Quorum sensing
rmuc04146
Peroxisome
Module
rmuc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FOB66_08240
00071 Fatty acid degradation
FOB66_08240
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FOB66_08240
09145 Cellular community - prokaryotes
02024 Quorum sensing
FOB66_08240
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmuc01004
]
FOB66_08240
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmuc04147
]
FOB66_08240
Enzymes [BR:
rmuc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FOB66_08240
Lipid biosynthesis proteins [BR:
rmuc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FOB66_08240
Exosome [BR:
rmuc04147
]
Exosomal proteins
Exosomal proteins of breast milk
FOB66_08240
Exosomal proteins of breast cancer cells
FOB66_08240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QET92814
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All DBs
Position
4:complement(1077913..1079676)
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AA seq
587 aa
AA seq
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MTIGGSDRMTERWDSLPAMLLGLAARWRDRPMLRHWVRDGSGGDWQRMSWAGFAHAVAAA
AAGLRARGVMPGDRVLLVSENRPEFPIADTAIMAIGAVTVPTYTTNTVADHAHILRNSGA
RVAIASTAGLASRIAEAARQAQGRNEGGGNEGGGNDPGLDLLVCMEEAPGTLSWQALTAD
PGDLALLVAEVAQIPPGRLACLVYTSGTGGLPRGVMLPHRAMLANQAGLATVVRRLKLEG
ECYLSFLPLSHAYEHTVGNFLLPSLGMEVVYSRGADRLAAEFTEIEPALVTAVPRLFQVL
RHRILTQVEKEAGWKQRLFRQAIALGLRRMDGPPLSLLERIEDAALDRLVRAKLRARFGR
RLVAMVSGGARLDPELSGFFLALGVTVLQGYGQTEAGPVVSVNLPWDNRRDSVGAPLPGV
ETMIAEDGELLLRGELVMDGYWNAPEATAAALEGGWLHTGDTGEIDSAGHIVIRDRKKDF
IKTLGGDMVSPAKIEGLLMAEPEIAQAVIAGEGRQGVVALLVPAEGAEERVGPAVDRVNA
RLSSIERIRRWRLVEPFTVENGLMTPTLKVRRRIVLQQHAPLVEALY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagggggaagcgacagaatgaccgaacgctgggacagcctccccgccatgctg
ctgggcctggccgcgcgctggcgcgaccggccgatgctgcgccactgggtccgggacggg
tcgggcggggactggcagcggatgagttgggccggattcgcccatgcggtggccgccgcc
gccgccgggctgcgcgcccgcggggtgatgccgggcgatcgcgtgctgctggtcagcgag
aaccggccggaattccccatcgccgacaccgccatcatggccatcggcgcggtcacggtg
ccgacctacaccaccaacaccgtggccgaccacgcccatatcctgcgcaacagcggcgcc
cgggtggccatcgcctccaccgccgggctggccagccggatcgccgaggcggcacggcag
gcccagggacggaatgagggtggggggaacgaggggggcggcaacgacccggggctggac
ctgctcgtctgcatggaggaagcgccggggaccctgtcctggcaggcgctgaccgccgat
ccgggcgacctcgccctgctggtggcggaggtggcgcagatcccgcccgggcggctggcc
tgcctcgtctatacctccggcaccggcggcctgccgcgcggcgtgatgctgccgcaccgg
gccatgctggcgaaccaggccggactcgccacggtggtcaggcggctgaagctggagggc
gagtgctacctctccttcctgcccctctcccatgcctacgagcacacggtcggcaacttc
ctgctgccctcgctcggcatggaggtggtctacagccgtggcgccgatcggctggccgcc
gagttcaccgagatcgagcccgccctggtgaccgccgtgccgcgcctcttccaggtgctg
cgccaccgcatcctgacccaggtcgagaaggaggccggctggaagcagcgcctgttccgc
caggccatcgccctcggcctgcgccggatggacgggccgcccctgtccctgctggagcgg
atcgaggacgcggcgctggaccggctggtgcgcgcgaagctgcgcgcccgcttcggccgg
cggctggtggcgatggtgtccggcggcgcccggctggacccggagctttcgggcttcttc
ctggccctcggcgtgaccgtgctgcagggctatggccagaccgaggccgggccggtggtc
agcgtcaacctgccctgggacaatcgccgcgacagcgtcggcgcccccctgcccggcgtc
gagacgatgatcgcggaggatggcgagctgctgctgcggggcgagctggtgatggacggc
tactggaacgccccggaggccaccgccgcggcgctggaaggcggctggctgcacaccggc
gataccggcgagatcgactcggcgggacatatcgtcatccgcgatcgcaagaaggacttc
atcaaaaccctgggcggtgacatggtgagccccgccaagatcgaggggctgctgatggcg
gagccggagatcgcccaggccgtgatcgccggcgagggccgccagggcgtggtggcgctg
ctggtgccggcggaaggcgccgaggagcgggtcggcccggcggtggaccgggtgaacgcg
cggctgtccagcatcgagcgcatccgtcgctggcggctggtcgagcccttcaccgtcgag
aacgggctgatgacaccgaccctgaaggtccgccgccgcatcgtgctgcaacagcacgcc
ccgctggtggaggccctgtattga
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