Roseomonas mucosa: FOB66_11280
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Entry
FOB66_11280 CDS
T06208
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rmuc
Roseomonas mucosa
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmuc03032
]
FOB66_11280 (topA)
03400 DNA repair and recombination proteins [BR:
rmuc03400
]
FOB66_11280 (topA)
Enzymes [BR:
rmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FOB66_11280 (topA)
DNA replication proteins [BR:
rmuc03032
]
Prokaryotic type
DNA Topoisomerases
FOB66_11280 (topA)
DNA repair and recombination proteins [BR:
rmuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOB66_11280 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
QET93333
LinkDB
All DBs
Position
4:1725505..1728243
Genome browser
AA seq
912 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGGGYKVIASFGHVRDLPAKDGSVRPEEGFAMDWESEERGE
RQLREIASALKGAKRLFLATDPDREGEAISWHVREMLEKKRLLKGLEVHRITFNEITKRA
VQYAIDHPRDLDTPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFRPREYWTVETRFATPIEAHFTARLTHLDGRRLEQFDLPDEAAAKRAVAAIEA
GEFSVASVEKKRVRRNPQAPFTTSTLQQEASRKLGFGAQATMRLAQQLYEGVEIGGETVG
LITYMRTDGVQMSAEAIQAIRGHVGEEFGQNYLPPQAREYSSRAKNAQEAHEAIRPTDVQ
RTPMQVARYLNPDQRRLYDLVWKRAVASQMASAELDQTTVEIAEGTGRTKLRATGSVIAF
DGFLKLYREDVDDAPAAALGDEDGRVLPPMAERDALKRGEVTPEQHFTQPPPRYSEASLV
KKMEELGIGRPSTYASILQTLQDRSYVKLEKRRFQPEDRGRLVTAFLVAFFERYVDTNFT
AALEEKLDDISGGRADWREVMAEFWDAFSKAVAATKDLKISDVIDALDEDLGPHFFPPAD
DGKDPRECPNCHTGRLGLRLGKTGAFIGCSNYPECRYTRPLIAPGAEGDEAAGFADGVRE
LGTSPDGLPVTMRRGPYGIYVQLGEPGVDEKGKPTKPRRASLTRGMEPEGVTLERALALL
SMPRIVGVHPETGEEITAHLGRFGPYLTMGTLSKSLDKDDDVLTIGLNRAVALLADAKPR
SVVLGEHPKDGVPVEIRRGRFGPYAQHGQIVASLPRNVQAEDFTLEQAVALLAEKGKPLP
AKGGKGGAKGKAKAGAKKAAAKPAAGDGEAKPAAKAPATKKAAPRKAAGKTVAKAAAGKP
TAKPAARKTAKA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcgtcgtcgtagaatcccccgccaaggccaagaccatcaacaagtacctg
ggtggcggctacaaggtcatcgcctccttcggccatgtgcgcgacctgcccgccaaggac
ggttccgtgcggcccgaggaaggcttcgccatggactgggagtccgaggagcgcggggag
cggcagctgcgcgagatcgcctcggcgctgaagggggccaagcggctcttcctcgccacc
gacccggaccgcgagggcgaggccatctcctggcatgtgcgggagatgctggagaagaag
cggctgctgaagggcctcgaggtccaccgcatcaccttcaacgagattaccaagcgcgcc
gtccagtacgccatcgaccatccgcgcgaccttgatacgccgctgatcgaggcctatctg
gcccggcgcgcgctcgactacctcgtgggcttcacgctgtcccccgtgctctggcgcaag
ctgccgggcagccgctcggccgggcgggtgcagtcggtcgcgctgcgcctgatctgcgag
cgcgaggcggagatcgaggtcttcaggccacgcgagtactggacggtggagacgcgcttc
gccacgccgatcgaggcgcatttcaccgcgcggctgacgcatctggacggcaggcggctg
gagcagttcgacctgccggacgaggccgccgcgaagcgcgccgtcgccgccatcgaggcg
ggcgagttcagcgtcgcctcggtcgagaagaagcgggtccgccgcaatccgcaggcgccc
ttcaccacctcgaccctgcagcaggaggcctcgcgcaagctgggcttcggtgcccaggcg
acgatgcgcctggcgcagcagctctacgagggcgtggagatcggcggcgagacggtcggc
ctgatcacctatatgcggaccgacggcgtgcagatgtcggccgaggcgatccaggccatc
cgcggccatgtcggcgaggaattcggccagaactacctgccgccgcaggcccgcgaatat
tcctcccgcgccaagaacgcccaggaggcgcacgaggcgatccgcccgaccgacgtgcag
cgcaccccgatgcaggtggcacgctacctgaacccggaccagcgtcgcctctacgacctg
gtctggaagcgcgccgtggccagccagatggcctcggcggagctggaccagaccacggtg
gagatcgccgagggcacgggccggacgaagctgcgcgccaccggctcggtgatcgccttc
gacggcttcctgaagctgtaccgcgaggatgtggacgacgcccccgccgccgccctcggc
gatgaggatggccgcgtgctgccgccgatggcggagcgggacgcgctgaagcgcggtgag
gtcacgcctgagcagcatttcacccagccgccgccgcgctattccgaggcttccctggtg
aagaagatggaggagctcggcatcggccgcccctccacctatgcctccatcctgcagacg
ctgcaggaccgcagctatgtgaagctggagaagcgccgcttccagccggaggatcgcggc
cgcctcgtcaccgccttcctggtggccttcttcgagcgctacgtggacaccaacttcacc
gccgcgctggaggagaagctcgacgacatcagcggcggccgcgccgactggcgggaggtc
atggccgagttctgggacgccttctccaaggccgtggccgcgaccaaggacctcaagatc
agcgacgtgatcgacgcgctggacgaggatctggggccgcacttcttcccgccggccgac
gacggcaaggacccgcgcgaatgcccgaactgccataccgggcggctcgggctgcggctg
ggcaagacgggcgccttcatcggctgctccaactacccggaatgtcgctacacccgcccg
ctgatcgcccccggcgccgagggtgacgaggcggcgggcttcgccgacggcgtgcgtgag
ctgggcacgagcccggacgggctgccggttaccatgcggcgcggaccctatggcatctat
gtccagctcggcgaaccgggggtggacgagaagggcaagccgaccaagccgcgccgcgcc
agcctgacccggggcatggagccggaaggggtgacgctggaacgcgccctcgccctgctg
tccatgccgcgcatcgtcggggtgcatcccgagacgggcgaggagatcaccgcccatctc
gggcgtttcggcccgtatctgaccatgggcacgctgtccaagtcgctcgacaaggacgat
gacgtgctgaccatcggcctgaaccgggccgtggcgctgctggccgacgccaagccacgt
tccgtggtgctgggcgagcacccgaaggatggcgtgccggtcgagatccgccgcggccgc
ttcggcccctatgcccagcatggccagatcgtggccagcctgccccgcaacgtccaggcg
gaggatttcaccctggaacaggcggtggcgctgctggccgagaagggcaagccgcttccc
gccaagggaggcaagggcggagccaaaggcaaggccaaggccggagcgaagaaggcggcc
gcgaaacccgccgccggcgacggggaggcgaagcccgccgccaaggcccccgccacgaag
aaggccgcgccgcgcaaggcggccggcaagacggtggccaaggccgccgccggcaagccc
acggccaagccggcggcgcgcaagaccgccaaggcctga
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