Roseomonas mucosa: FOB66_13935
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Entry
FOB66_13935 CDS
T06208
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rmuc
Roseomonas mucosa
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmuc03032
]
FOB66_13935 (gyrB)
03400 DNA repair and recombination proteins [BR:
rmuc03400
]
FOB66_13935 (gyrB)
Enzymes [BR:
rmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FOB66_13935 (gyrB)
DNA replication proteins [BR:
rmuc03032
]
Prokaryotic type
DNA Topoisomerases
FOB66_13935 (gyrB)
DNA repair and recombination proteins [BR:
rmuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FOB66_13935 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QET93796
LinkDB
All DBs
Position
4:2289179..2291662
Genome browser
AA seq
827 aa
AA seq
DB search
MSDPALPEQSPSGQEGGEAYDSASITVLRGLDAVRKRPGMYIGDTDDGSGLHHMVFEIVD
NSVDEAQAGYATHVDVVINADGSVTVTDDGRGIPVDLHVEEGISAAEVVLTRLHAGGKFN
QNSYKVSGGLHGVGAAVVNALSERMEARIWKNGREHVIRFAHGDTVAPLEDIGPSGHPTG
TQVTFKPSAATFSKTDFDYERLEKRLRELAFLNSGLRITLQDDRPVEGTAEGAAEPRRTV
FHYEGGLAAFVEYLDRSNKPIFSPPAAATGEQTVERNGESKTIRVEFALRWTDSFHETMH
CFTNNIPQRDGGSHLAGFRQALTRVLGKVAEQAAKKDKTALSGEDMREGLTAVLSVKVPD
PKFSSQTKEKLVSSEVQPVVHSVVADALDHWFETHPKEANEIVRKCLDAAAAREAARKAR
DLTRRKGVLDISSLPGKLADCQERDPSKAEIFIVEGDSAGGSAKQGRDRAFQAILPLRGK
VLNVERARFDKMLSSEQIGTLITALGAGIGPDPANGGFDPAKLRYGKICIMTDADVDGSH
IRTLLLTFFFRQMPELIERGHLFIAQAPLYRAKRGSEERYLKDDAAMEEYLLEKALHNAA
MTLSDGTALEGEALREEVQKLREVSRRIRRASGNLPLWIGEQAALAGAMAVANDGQAAQA
LARRLNELSLETERGWSASLDEAGLKLGRTVRGVAERYSLEPALLRGADALWLEERRESL
AGRYGSGVTLRFEGREDRSAGPLSALDRVFQQGRKGLTIQRFKGLGEMNPDQLWKTTLDP
AARTMLRVKVDDADEAGQIFATLMGDVVEPRREFIVGNALKVANLDV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccccgcgcttccagaacagtccccttccggccaggagggcggggaagcctat
gacagtgcctccatcaccgtgctgcgtggcctggacgccgtccgcaagcgaccgggcatg
tatatcggcgacacggatgacggctcgggcctgcaccacatggtcttcgagatcgtggac
aactccgtggacgaggcccaggcgggctatgccacccatgtcgatgtggtgatcaacgcc
gacggctccgtcaccgtcaccgatgacggccgcggcatccccgtggacctgcatgtggag
gaaggcatctccgccgccgaggtggtgctgacgcggctgcatgcgggcggcaagttcaac
cagaactcctacaaggtttccggcggcctgcacggtgtcggcgcggcggtggtgaacgcc
ctgtccgagcggatggaggcacgcatctggaagaatgggcgcgagcacgtgatccgcttc
gcgcatggcgatacggtggcgccgctggaggatatcggcccctccggccatcccacaggc
acgcaggtcaccttcaagcccagcgccgcgaccttctcgaagaccgatttcgactacgag
cggctggagaagcggctgcgcgagctggccttcctcaattccggcctccgcatcacgttg
caggacgaccggcccgtggaaggtaccgcggaaggcgcggccgagccgcgccgcacggtc
ttccactacgagggcgggcttgccgccttcgtcgaatatctcgaccgttccaacaagccg
atcttctcgccccctgccgccgcgaccggcgagcagacggtggagcgcaatggcgagagc
aagacgatccgcgtcgagttcgcgctgcgctggaccgacagcttccacgagaccatgcac
tgcttcaccaacaacatcccgcagcgggatggcggctcgcacctcgcgggcttccgccag
gcgctgacgcgggtgctgggcaaggtggcggagcaggcggcgaagaaggacaagaccgcg
ctgtccggcgaggacatgcgcgaggggctgaccgccgtgctctcggtgaaggtgccggac
ccgaaattctcctcccagaccaaggagaagctcgtttcctccgaggtgcagccggtggtg
cactcggtcgtcgccgatgcgctggaccattggttcgagacgcaccccaaggaagccaac
gagatcgtccgcaagtgcctcgatgccgccgcggcgcgcgaggccgcccgcaaggcgcgc
gacctgacgcggcgcaagggcgtgctcgacatctcctccctgcccggcaagctcgccgat
tgccaggagcgcgatccgagcaaggcggagatcttcatcgtcgagggtgactcggccggt
ggttccgccaagcagggtcgcgaccgcgccttccaggcgatcctgccgctgcgcggcaag
gtgctgaacgtcgagcgcgcgcgcttcgacaagatgctgtcctcggagcagatcggcacg
ctgatcaccgcgctcggcgccggcatcggccccgacccggcgaatggcggcttcgacccg
gccaagctgcgctacggcaagatctgcatcatgaccgacgcggacgtggacggctcccac
atccgcacgctgctgctgaccttcttcttccggcagatgccggaactgatcgagcgcggg
catctcttcatcgcccaggcgccgctctatcgcgccaagcgcggcagtgaggaacgctac
ctcaaggacgacgcggcgatggaggagtacctgctggagaaggcgctgcacaacgcggcg
atgacgctcagcgacggtacggcgctggagggtgaggcgctgcgcgaggaggtgcagaag
ctgcgcgaggtgtcgcgccgcatccgccgcgcctccggcaacctgccgctctggatcggc
gagcaggccgcgctggccggtgccatggccgtggccaatgacggtcaggcggcgcaggcc
ctggcgcggcggctgaacgagctgtcgctggaaacggagcgcggctggtccgcctcgctg
gacgaggccgggctcaagctgggccgcaccgttcgcggcgtggccgagcgctattccctg
gaacccgccctgctgcgcggcgccgacgcgctctggctggaggagcggcgggagtccctg
gccgggcgctacggcagcggcgtcaccctgcgcttcgaggggcgcgaggaccgttcggcc
ggtccgctctcggcgctggaccgcgtcttccagcagggccgcaagggcctgaccatccag
cgcttcaaggggctgggcgagatgaacccggaccagctctggaagaccacgctggacccg
gcggcgcgcaccatgctgcgggtgaaggtggatgacgccgacgaggccgggcagatcttc
gccacgctgatgggcgacgtggtcgagccgcgccgcgaattcatcgtcggcaatgcgctg
aaggtggcgaacctggacgtctga
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