Roseomonas mucosa: FOB66_15300
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Entry
FOB66_15300 CDS
T06208
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rmuc
Roseomonas mucosa
Pathway
rmuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOB66_15300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmuc03021
]
FOB66_15300
03400 DNA repair and recombination proteins [BR:
rmuc03400
]
FOB66_15300
Enzymes [BR:
rmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOB66_15300
Transcription machinery [BR:
rmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOB66_15300
DNA repair and recombination proteins [BR:
rmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOB66_15300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4270
Motif
Other DBs
NCBI-ProteinID:
QET94029
LinkDB
All DBs
Position
4:complement(2590558..2591574)
Genome browser
AA seq
338 aa
AA seq
DB search
MLDRNWRSLIKPERLDVDPGADPARVATVVAEPLERGFGQTLGNALRRVLLSSLQGAAVT
AVKIEGALHEFSSLQGVQEDVTDIILNIKQLAIRMPSEGTKRLTLEATGPGEVTAGQIQV
TGDIEVANPELVICTLDDGARFSMELTVSTGKGYVPASENRTEDQEIGLIPVDAIYSPVR
RVAFQVQPTRVGQRTDYDKLVLTVETDGTVAPDDAVALAARILQDQLQLFINFDEPREAK
VQEVQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKSEQEMLRTPNFGRKS
LNEIKEVLASMGLSLGMNVPGWPPENIEDLARRVEEPF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctggatcgcaattggcgttccctgatcaagcccgagcgcctggacgtcgatccgggc
gctgaccccgcgcgcgtggccaccgtggtcgccgagccgctggagcgcggtttcggtcag
actctgggcaacgcgctgcggcgggttctgctgtcctcgctccagggcgcggccgtcacg
gccgtgaagatcgagggcgcgctgcacgagttcagcagcctgcagggtgtgcaggaggat
gtcaccgacatcatcctgaacatcaagcagctggccatccgcatgccctccgagggcacg
aagcgcctgacgctggaggccaccggccccggcgaggtgacggcgggccagatccaggtg
accggcgacatcgaggtcgccaacccggagctggtgatctgcacgctcgacgatggggcg
cgcttctccatggaactcaccgtctcgacgggcaagggctatgtccccgcctccgagaac
cggaccgaggaccaggagatcggcctgatcccggtggacgcgatctattcgcctgtccgc
cgcgtcgccttccaggtgcagccgacccgcgtcggccagcgcaccgactacgacaagctc
gtgctcacggtggagaccgacggcacggtcgcgccggatgacgcggtggcgctcgccgcc
cgcatcctgcaggaccagctgcagctcttcatcaacttcgacgagccgcgcgaggccaag
gtgcaggaggtgcaggacgacctgcccttcaaccgcaacctgcttcgcaaggtcgatgag
ctggagctgtcggtccgcagcgcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctcgtgcagaagtccgagcaggagatgctgcgcaccccgaatttcgggcgcaagtcc
ctgaacgagatcaaggaggttctcgcctccatgggtctcagcctcggaatgaacgtgccg
ggctggccgcctgagaacatcgaggacctggctcgccgggtcgaagagcccttctga
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