Roseomonas mucosa: FOB66_15445
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Entry
FOB66_15445 CDS
T06208
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rmuc
Roseomonas mucosa
Pathway
rmuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOB66_15445 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmuc03021
]
FOB66_15445 (rpoC)
03400 DNA repair and recombination proteins [BR:
rmuc03400
]
FOB66_15445 (rpoC)
Enzymes [BR:
rmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOB66_15445 (rpoC)
Transcription machinery [BR:
rmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOB66_15445 (rpoC)
DNA repair and recombination proteins [BR:
rmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOB66_15445 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QET94056
LinkDB
All DBs
Position
4:complement(2606510..2610721)
Genome browser
AA seq
1403 aa
AA seq
DB search
MNELMKILGQTGQAVSFDQIKITIASPEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIELASPVAHIWFMKSL
PSRVGLMVDMSLKELEKVLYFESYVVLEPGLTDLKLHQLLTEDQYQNKMDEFGEDAFSVG
IGAEAVKQMLTGIDLGKESATLRAELKETSSEAKRKKYVKRLKLIESFAEGGARPEWMIL
DVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QEAVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGIYYLSLETPEFRASADKAEYDADGRLAKAG
PPVFADLGELEQALAAGSITLHTKILARRKTMRPDGSVVKERVVTTPGRMMIGALLPLHP
SLPYALVNRQLTKKNVSDVIDAVYRHCGQKESVIFADRLMGLGFRNAAKAGISFGKDDMV
IPDSKGEMIDRTKAEVKEFEQQYLDGLITAGERYNKVVDAWSRATEEVAGAMMKEISKQE
VGTPTNSVWMMSHSGARGSPAQMRQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLEYFN
STHGARKGLADTALKTANSGYLTRRLVDVAQDCIIVDIDCGTERGITVRAVMDGGEVVSS
LSERILGRTVQREIVHPDTGEVLAERNTLVEEALADRIEKAGVEEVYIRSVLTCDSRSGV
CGHCYGRDLARGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSAVEATT
DATVRITNLSVVENSQGAPVVMSRNCEIVLTDGQNRERARFRVPYGSRILVAEGAQVQRG
QKLAEWDPFTLPIITERAGFVEYADLIEGITLVERQDEVTGLSSKVVVDYKASSKADLRP
RLILKDEKGGVVKLPNGAEARYFLSPDTILSVDNGATVHAGDVIARLPRESSKTRDITGG
LPRVAELFEARRPKDAAIISDIDGRVEFGKDYKAKRRIIVKQDVPDGEAPIEREYLVPKG
KHVSVQEGDYVKAGDPLVDGPRVPHDILRVLGVEALANYLVNEIQDVYRLQGVKINDKHI
EVIVRQMLQKVEILEPGDTTYLIGEQVDRIEFDIENEHRLRAKERPARAEPVLQGITKAS
LQTNSFISAASFQETTRVLTEAAVAGKVDTLAGLKENVIVGRLIPAGTGSVMNRLRALAA
QRDKGRLPASTPALTGGSQEAAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagctgatgaagatccttggccagaccggccaggctgtgagcttcgaccagatc
aagatcaccatcgcgtcgccggagcagatccgctcctggtcctatggcgagatcaagaag
cccgagacgatcaactaccgcaccttcaagcccgagcgggacgggctgttctgcgcgcgc
atcttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcggatgaagttc
cgcggcatcatctgcgagaagtgcggcgtcgaggtgacgctggccaaggtgcgccgcgag
cgcatgggccatatcgagctggcctcgccggtcgcgcatatctggttcatgaagtcgctg
ccctcgcgcgtcggcctgatggtcgacatgtcgctgaaggagctggagaaggtcctctac
ttcgagtcctatgtggtgctggagccaggtctgaccgacctcaagctgcaccagctcctc
accgaggaccagtaccagaacaagatggacgagttcggcgaggacgccttctccgtcggc
atcggggccgaggcggtcaagcagatgctgaccggcatcgacctgggcaaggagagcgcg
acgctgcgcgccgagctgaaggagacctcctccgaggccaagcgcaagaagtacgtcaag
cggctgaagctgatcgagagcttcgccgagggcggcgcgcggccggaatggatgatcctg
gacgtggtgccggtgatcccgcccgagctgcgcccgctggtgccgctggacggtggccgc
ttcgcgacctccgacctgaatgacctgtaccgccgcgtcatcaaccgcaacaaccgcctg
aagcggctgatcgagctgcgcgcccccgacatcatcgtgcgcaacgagaagcgcatgctg
caggaggcggtggacgcgctgttcgacaacggccggcgcgggcgggcgatcacgggcgcc
aacaagcggccgctgaagtcgctctccgacatgctgaagggcaagcagggccggttccgg
cagaacctgctgggcaagcgcgtcgactattccggccgttcggtgatcgtggtgggtccc
gagctgaagctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaagccc
ttcatctactcgaagctcgagaagtacggccacgccaccaccatcaaggccgccaagcgg
atggtggagaaggagcgtcccgaggtgtgggacatcctggaggaggtgatccgcgagcat
ccggtgatgctgaaccgggcgccgacgctgcaccgcctgggcatccaggccttcgagccg
acgctggtcgagggcaaggcgatccagctgcacccgctggtctgcaccgccttcaacgcc
gacttcgacggcgaccagatggccgtgcacgtgccgctgagcctggaggcccagctggaa
gcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacggcaagccgatc
atcgtgccgtcgcaggacatcgtgctcggcatctactacctgagcctggaaacgccggag
ttccgtgcctcggccgacaaggccgagtatgacgcggacgggcggctggcgaaggccggg
ccgccggtcttcgccgacctgggcgagctggagcaggccctggcggccggcagcatcacg
ctgcacaccaagatcctggcgcggcgcaagacgatgcgcccggacgggtcggtggtgaag
gagcgggtggtgaccacgccgggccggatgatgatcggcgcgctgctgccgctgcatccc
agcctgccctatgcgctggtgaaccgtcagctgacgaagaagaacgtctccgacgtgatc
gacgcggtgtaccgccattgcggccagaaggagagcgtgatcttcgccgaccggctgatg
ggcctgggcttccgcaacgcggccaaggcgggcatctccttcggcaaggacgacatggtc
atccccgacagcaagggggagatgatcgaccgcaccaaggccgaggtgaaggagttcgag
cagcagtatctcgacggcctgatcaccgcgggcgagcgctacaacaaggtggtcgatgcc
tggtcgcgtgccaccgaggaggtggcgggcgccatgatgaaggagatctccaagcaggag
gtcggcacgccgaccaactcggtctggatgatgtcgcattccggtgcccgcggttcgccg
gcccagatgcgccagctcgccggcatgcgcggcctgatggccaagccctcgggcgagatc
atcgagcagccgatcatcgcgaacttcaaggaaggcctgtcggtgctggagtacttcaac
tccacgcacggcgcccgcaagggcctggccgacaccgcgctgaagaccgcgaactccggc
tacctgacccgccgcctggtggacgtggcgcaggactgcatcatcgtggacatcgattgc
gggaccgagcgcggcattaccgtgcgggccgtgatggatggcggcgaggtcgtctcctcg
ctgtccgagcggatcctgggccggacggtgcagcgcgagatcgtgcatccggacacgggc
gaggttctggccgagcggaacacgctggtcgaggaggcgctcgccgaccggatcgagaag
gccggggtggaggaggtctatatccgctccgtcctgacctgcgacagccgttcgggcgtc
tgcggccactgctatggccgtgacctggcgcgcggcacgccggtgaacgtgggcgaggcg
gtcggtgtgatcgcggcccagtcgatcggcgagccgggcacgcagctgaccatgcgtacc
ttccacatcggcggcgccgcccagcgcggggcggagcagtcggcggtggaggccacgacc
gacgccacggtgcggatcaccaacctctcggtggtggagaacagccagggcgcgccggtg
gtgatgagccgcaactgcgagatcgtgctcacggatggccagaaccgcgagcgggcgcgc
ttccgcgtgccctatggctcgcgcatcctggtggcggagggggcgcaggtccagcgcggc
cagaagctggccgagtgggaccccttcaccctgccgatcatcacggagcgggccggtttc
gtggaatatgccgacctgatcgagggcatcaccctggtcgagcggcaggacgaggtgacc
ggcctctcctccaaggtggtggtggactacaaggcctcctccaaggccgacctgcgcccc
cgcctgatcctgaaggacgagaagggcggcgtggtgaagctgccgaacggggccgaggcg
cgctacttcctttcgcccgacacgatcctgtcggtggacaatggcgcgacggtgcatgcc
ggcgacgtcattgcccgcctgccgcgtgaatcctcgaagacccgcgacatcacgggcggc
ctgccgcgcgtggcggagctgttcgaggcccgccggccgaaggatgccgcgatcatcagc
gacatcgacggccgggtggaattcggcaaggattacaaggcgaagcgtcggatcatcgtg
aagcaggacgtccccgacggggaggctccgatcgagcgcgagtacctggtgccgaagggc
aagcacgtctcggtgcaggagggcgactacgtcaaggccggcgacccgctggtggacggc
ccccgcgtgccgcacgacatcctgcgggtgctgggtgtcgaggcgctggccaactacctc
gtgaacgagatccaggacgtctatcgtctccagggcgtgaagatcaacgacaagcacatc
gaggtgatcgttcgccagatgctgcagaaggtcgagatcctggagccgggcgacaccacc
tacctgatcggggagcaggtggaccggatcgagttcgacatcgagaacgagcatcgcctg
cgggcgaaggagcggccggcccgggcggagccggtgctgcagggcatcaccaaggcgagc
ctgcagaccaactccttcatctccgcggcctccttccaggagaccacccgggtgctgacc
gaggcggcggtggccggcaaggtcgataccctggcgggcctgaaggagaacgtgatcgtc
ggccggctgatcccggcgggcacgggctcggtgatgaaccggctgcgggcgctggccgcg
cagcgggacaaggggcgactgccggcctcgactccggctctgacgggcgggagccaggaa
gcggccgagtag
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integrated database retrieval system
